Hydra vulgaris (swiftwater hydra): 101237952
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Entry
101237952 CDS
T01080
Symbol
LOC101237952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-B isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
101237952 (LOC101237952)
04121 Ubiquitin system [BR:
hmg04121
]
101237952 (LOC101237952)
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101237952 (LOC101237952)
Membrane trafficking [BR:
hmg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101237952 (LOC101237952)
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101237952 (LOC101237952)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Zn_ribbon_19
zinc_ribbon_16
zf-RING_5
zf-RING_Vps41
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101237952
NCBI-ProteinID:
XP_012555640
LinkDB
All DBs
Position
13:complement(43576988..43610383)
Genome browser
AA seq
248 aa
AA seq
DB search
MAAVSEELANGYFCHNCYGHVSVDLRDFTCAGCGNGCVEESTEGAVPNSFVESNALEPIQ
QFADEWYQRHFEGRERRRRAGSHMRTSGPQMMFQIGNGQGSSVFYSSDVDRPFGTFFQQL
LQNLGLPMMMDGTNFNIGSGQLGDYVWGPNGLDNIITQLLNQIDRTGPAPADKTKIDSIP
VNIITQTDVDENLECAVCKDEYNVGDTVKKLPCCHVFHSQCVDPWLEMHDSCPICRCNLD
GQRPKAEG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttagtgaagaattggctaatggttatttttgtcacaattgttatggtcat
gtttctgttgatttaagggattttacatgtgctggttgtggaaatggttgcgtcgaggaa
agcactgaaggagctgtaccaaattcgtttgttgaatccaatgctcttgagccgattcag
caatttgcggatgagtggtaccaaagacattttgaaggaagagaaaggaggagaagagca
ggatctcatatgagaacgagcggtccacaaatgatgtttcaaattggcaatggacaaggc
tcatcagtgttttattcatctgatgttgataggccatttgggacattttttcaacaactg
ctacagaatcttggactaccgatgatgatggatggaacaaattttaacattggtagtgga
caattaggtgattatgtttggggcccaaatggactagacaatattattacacagttgcta
aatcaaattgatcgaacaggcccagcaccagctgataaaaccaaaattgattcaatacct
gtaaatattatcacacaaactgatgttgatgaaaatttggagtgtgcagtatgtaaagat
gaatataatgttggagatactgttaaaaaattaccttgctgtcatgtttttcattcacag
tgtgttgatccatggctagaaatgcatgattcttgtcctatttgtcggtgtaatctggat
ggtcaacgaccgaaagcggaaggataa
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integrated database retrieval system
