KEGG   Hydra vulgaris (swiftwater hydra): 101238227
Entry
101238227         CDS       T01080                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101238227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hmg03009]
    101238227
Ribosome biogenesis [BR:hmg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101238227
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Utp13 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_DCAF4 ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 WD40_like Beta-prop_DCAF12 WD_LRWD1 Beta-prop_WDR19_2nd Beta-prop_WDR35_TULP_N Utp12 UTP15_C WDR54 NTNH_C
Other DBs
NCBI-GeneID: 101238227
NCBI-ProteinID: XP_047145085
LinkDB
Position
12:29974160..30032683
AA seq 776 aa
MVTDPLRKNYELESTVKSFYTGGTSFLSKNGTEMLCTCGDVVNALDLSNGERIYQLKDDG
SDITCFAASPDGKILITACKALLLHQFSLSLRTFTRRWKVSHKTQVLAMTFDSSSTLLAT
GSSDTTIKIYDVVKMYYTHNFKGSQSSVSVLKFHPHTEKLSLISASVDGKIYMWDLQTSK
CVSVLDGHYSPVTSLEFSQDALVSAGRDKILVFWDLNSRKQIRTVPTFEVIESLVVVPKE
KSLFKNTSMKDTEFVVTAGENGSLRFWSLIGGFCAYTSQKENSESNIVQLHFDSNSEKLI
VVTEEHNIIVYNPISLKPILKFVGHFDEILDLKFFGENEEYIGMATNSNQINIMQRGLLS
SHMLKGHSDIVLSIDVSFNGKYLASSSKDNTIRVWCKDEEEDKFCCVAVGNGHTHAVSSI
SWPVLSTDYLVTGSQDLTLKCWKLPSLLLKTECVNLHVKWTEKAHDKDVNVVRISPNDKI
LVSGSQDKMAKVWKFKSGTLLGTLRGHKRGIWCACFSPVDQCIATGSADSTIKLWTLSDF
TCVKTFEGHSNSVLKVHFLLKGMQVVSSGSEGLIKVWNIRNNECISTVEAHDEKIWCLAV
NKEESTIISGGSDSTVKIWKDVTEKLMVEEEEKANLKLENEQELSNLIQNKQFEKAIGLA
LRLEQPFRVLGIFKDILDKDASQIQDIISQLDNEQLSKLLSFVCHWNTNSKHASVSQFVL
SAVLKEKSADELLEFTSIKEIIESLLPYTERHYERISQLVQQSLFVTYTWESMKLS
NT seq 2331 nt   +upstreamnt  +downstreamnt
atggttacagatcccttaagaaaaaactatgagttagaatcaactgttaaatctttttat
acaggaggaacatcatttctatcaaaaaatggtacagaaatgttgtgcacttgtggagat
gttgtaaatgccttagatctatcaaatggggaacgaatctatcaattgaaagatgatgga
agtgatattacctgttttgctgcatctcctgatggcaaaattttaataactgcttgtaaa
gcactgttgctacatcaatttagtctaagtctgagaacatttacgagacgctggaaggtt
tctcacaaaactcaggttcttgcaatgacttttgattcttcatcaacattattagcaaca
ggctccagcgacaccacaattaaaatttatgatgttgtaaaaatgtattatacccacaac
ttcaagggttctcaaagttcagttagtgtacttaaatttcatcctcacacagaaaaatta
tctttaatatctgcttcagttgatggaaaaatatatatgtgggatttgcaaacaagcaag
tgtgtgtcagtactagatggtcattacagccctgttacatcattagagttttcacaagat
gcattagttagtgcagggcgagataaaattcttgtgttttgggacttgaattctagaaag
caaattaggacagttccaacttttgaggtaatagaaagtttggttgttgttccaaaagaa
aagtccttatttaaaaataccagtatgaaagacacagagtttgttgttactgctggtgaa
aatggtagcttgcggttttggagtttgattggtggattttgtgcttatacttcacaaaaa
gaaaattcagagtcaaatattgtacaactccacttcgatagtaattctgaaaaacttatt
gttgtcacagaagaacataatataattgtgtataaccccatatcattgaaaccaatttta
aagtttgttggtcattttgatgaaattttggacctaaaatttttcggtgaaaacgaagag
tacattgggatggcaactaatagcaatcagatcaatattatgcagagaggattactttct
tctcacatgttgaaaggacatagtgatattgtgttatcaattgatgtaagtttcaatggc
aaatatctggcttcttcttctaaagataatactattcgagtgtggtgcaaagatgaagag
gaagataaattttgctgtgttgcagttggtaatggtcacactcatgcagttagtagtatt
tcctggcctgttctttcaactgattatttggtcactggaagtcaggatctgacattgaaa
tgctggaagctaccttctttactattgaaaactgaatgtgttaatttgcatgtaaaatgg
acagaaaaagctcatgataaggatgttaatgtggtaagaatatcacccaatgataaaatt
ttggtatctggctctcaagacaaaatggcaaaagtttggaagtttaaatcaggcactttg
cttggcacgttgcgtggtcacaaacgtggtatatggtgtgcttgtttctctcctgttgac
caatgcattgcgacaggatcagcagattctaccataaaattgtggactctatctgatttt
acttgcgttaagacatttgaaggtcacagtaattcagttttaaaagtacactttctatta
aaaggaatgcaagttgtttcaagtggctctgaaggactaataaaagtttggaatattcgt
aacaatgagtgtatatcaacagttgaagcccacgacgaaaagatttggtgtttagctgtc
aataaagaggagagtacaattatttcaggtggaagtgattctacagttaaaatatggaag
gatgttacagaaaaacttatggttgaagaagaagaaaaagcaaatttaaaactagagaat
gagcaagagttatcaaacttgattcaaaataaacaatttgagaaagcaattggtttggca
ttaagattagaacaaccattcagggtgcttggaatttttaaagatatacttgacaaagat
gcatcgcaaattcaagatattatatcacaactagataatgaacagttgagtaaactgctt
agttttgtatgtcactggaatacaaatagcaagcatgcttctgtctcgcagtttgtctta
tctgctgtcttgaaagaaaaaagtgcagatgagcttttagagtttacaagtataaaagaa
ataattgagtcattgctaccatatactgaaagacactatgaaagaattagtcagttggtt
cagcaatcactttttgtgacatacacatgggaatcaatgaagttatcttaa

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