Hydra vulgaris (swiftwater hydra): 101238546
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Entry
101238546 CDS
T01080
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101238546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
101238546
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101238546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101238546
NCBI-ProteinID:
XP_047142542
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Position
10:complement(22173560..22238799)
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AA seq
378 aa
AA seq
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MEDEENTEFDLNPMETDPGKMFIGGLPSQTTADILQRYFEKFGEVKESVVMRDSVTKRSR
GFGFVRFVDPKSVDQVQSSCPHIIDGKKIDPKRAVPKKSPLPGQNQFKKVFVGGLPPDTT
ARDLTEYFEAFGKVTEVLLMHDRTTKRLRGFGFVTFESDDAGKHVCETGFHKLKGKNVEC
KRAQPKEAMMLQGKSQGLVGNVVNLAPFSIGRGYHNGLSTVPIGFGFPDWTCNPQIYQHL
ANSVHFGRGRGYTSNYQGFINVSDHRRGNDQYFSEYTPVQTPTTIRTDVLHSNDCGQEYE
QNNFNTVGLTYHSATNTTPASPLSQVFNQTASGQDLVGYTTNSRAGLSDHHLYHNGHHAC
SNTQATFCHRMPQITLRQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaagaaaacaccgaattcgatttgaatccaatggaaaccgatccagggaag
atgtttataggaggactgccgagccagacaacggcagatattttgcaacgttactttgaa
aagtttggtgaggtcaaagaaagcgttgtaatgcgcgattcagttacaaaacgatcgagg
ggatttggttttgtccgctttgttgatccaaaatctgtagaccaagttcaaagctcttgc
cctcacatcatcgatggaaaaaagattgaccccaaaagagctgttccaaaaaagtcgcca
ctacctggtcaaaatcagtttaaaaaggtttttgttggtggcttgcctcctgatacaact
gcaagagatttgacagaatattttgaagcatttggaaaggtgactgaggttttattaatg
catgatcgcacaactaaaaggttgagaggttttggctttgttacttttgaatcggatgat
gcaggaaagcatgtctgtgaaacaggttttcacaaactcaaagggaagaatgttgaatgc
aagagagctcagccaaaagaagctatgatgttgcaaggtaaaagccaagggttggttggt
aatgtagtaaaccttgctcctttttccatcggccgtggatatcataatggtttatcaact
gtacctattggatttggttttcctgattggacttgtaacccacaaatttatcaacactta
gcaaattcggtgcattttgggcgtggaagaggttatacatcaaactatcaaggttttatc
aatgtttctgaccaccgacgcggcaatgaccaatatttttcagaatatactcccgtacag
acaccaacaacaattagaactgatgtattacattcaaatgattgtggtcaggaatatgaa
caaaataattttaacactgttgggttaacataccacagtgcaacaaatactacacctgct
tcaccactctctcaagtgtttaatcagactgcatctggtcaagacttagttggctataca
acaaattctagagcagggttgtctgatcatcatttatatcataatggtcaccatgcttgt
tcaaacacacaagcaactttctgtcatagaatgcctcaaattacattaagacaataa
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