Hydra vulgaris (swiftwater hydra): 101238793
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Entry
101238793 CDS
T01080
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
101238793
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101238793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
LIG3_BRCT
ResIII
BRCT
BRCT_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
101238793
NCBI-ProteinID:
XP_047141905
LinkDB
All DBs
Position
10:19847064..19934085
Genome browser
AA seq
980 aa
AA seq
DB search
MFKLKKSVENYQSNVKNTTYKETDYDELKLLGLQVKPHEYQIFGINWITRSFLSAKHCGN
ILGDEMGLGKTLQSVASLLHLKKKFNINGPFLVLSPLSVINSWEKEFERCAPELCVLTYI
GKKDQREEIQEKIASKYLTANWKNLKTEFDVLLTSYEVYLKDIFFLNKFCWKILIVDEAH
RLKNHTSLLYKELSMMDIGFKLLLTGTPVQNNLQEIYSLLSFIAPTVFMLDNIDEFVSYF
SLLVEDESHKRQELHELLKPFLLRRTKNEVLQNLPKKSEVILYCGISQTQKNLYKAILTK
DLGAFDREGGQKTRLLNILMQLRKCCNHPYIFPGIESEPFQLGEHLVESSGKLYLLDKLL
AFLKQSGHKVLLFSQMTSMLDIVQDYLGYRGYSYERLDGSVRGEERFLAVNNFNSSEDTF
IFLLSTKAGGQGLNLTSADTVIFLDSDFNPQNDLQAAARSHRIGQYRPVKIIRLLSKNTV
EEIILKRAEKKLKLTNVVIEGGQFSSIKSMELSEELGDILKYGLQDLMNSDDSLYEKIDF
EKVLGKTYESQWFSVDETQHVKVESNEDSEVKDNIYEFEGEDYSTATEKDKAVFEELLND
VLKLQGERSSRKDTKSFVELSFVKQKKRKQKDLTNEEKEELAKKREENKAKRIKMLEEKA
KEKILKLWETHKYNSCKLELPSCLDNENPSFEVESDDEEQVSHINYVVGDVTNPRQVNQR
DAIIVHCVDDSGYWGHGGLFSAINKHSKQPKEQYELAFKMKDLHLGDVHLINMQKTDFAI
YVALIVVFSRDRNNQISPMLLNYLSTSLEKIHHLAKETGASVHLPRIGYNSPNFNWYGTE
RLIKKILADQKVPTYIYYYKKFTQINSSSTDQLTPHLATESNESKFHVKDSLPDIFSGLA
VYFHGLNDLTEIRRLSRFVIAYDGEVDTSLTPDTTHVVTTSCGKRSLDYIPDSVKVVETG
WIDECCKQEKLVSEDLFIVK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattaaaaaagtctgtagaaaattatcaaagtaatgtaaagaatacaacatac
aaagaaacagattatgatgaattgaaattactaggacttcaagtaaaacctcatgaatat
caaatatttggcattaactggattacaaggtcttttttatcagctaaacactgtggcaac
attttaggggatgaaatgggattaggaaaaacacttcagtctgttgcatcattattgcat
ttgaaaaaaaagttcaatattaatggtccttttttggtactctcaccattgtctgttatc
aacagttgggaaaaagaatttgaaagatgtgcacctgaattgtgcgttcttacatacatt
ggcaaaaaagatcaacgtgaagaaattcaagagaaaattgcttcaaaatatctgactgca
aactggaaaaatctgaaaacagaatttgatgttttattgacatcttatgaggtttatttg
aaagacatcttttttttaaacaaattttgttggaaaatattgatagttgatgaagctcat
aggctgaaaaatcacacatcgctactctataaagagttatctatgatggatattggtttc
aaattactgctcactggcacaccagttcagaataatctgcaagaaatttacagtttgttg
tcattcattgccccaactgtgtttatgcttgataacattgatgagtttgtcagctacttt
tcattactagtagaagatgagtcacataaaagacaagaacttcatgagttgttgaaacca
tttttgttacgtaggacaaaaaatgaggttttacaaaatctcccaaagaagtcagaagta
attttatattgtgggatttcgcagacccagaaaaatctttataaagctattttaacaaaa
gatttaggggcttttgatagagaaggcggccagaaaacaagactactaaacattttaatg
cagcttcgaaaatgctgcaaccatccttatatatttcccggtatcgaatcagaaccattt
caacttggagaacatcttgttgaatcaagtggaaagctatatctcttggacaaactgcta
gcatttttaaaacaaagtgggcataaagttttgcttttttcacaaatgacttctatgtta
gatattgtacaagattatttaggctatagaggttattcctacgagagattagatggttcc
gttcgtggtgaagaaaggtttcttgcagttaataactttaacagttcagaagatacattc
atttttttgctcagtactaaagctggtggccaaggattaaatcttacatcagcagatact
gttatatttcttgacagtgattttaatcctcaaaatgatcttcaagctgctgcaagatct
catcgaattggacaatataggcctgtaaaaataattcgattgttgtcaaaaaatactgtt
gaagagattatattgaaacgagctgagaaaaaacttaagcttacaaatgttgttattgaa
gggggacaattttctagcataaagtcaatggaactatctgaagagcttggagacattttg
aaatatggattgcaagatctaatgaattcagatgacagtttgtatgagaaaattgatttc
gaaaaagtcttaggtaaaacatatgaaagtcaatggtttagtgtggatgaaactcagcat
gtgaaagtagaatcaaatgaagatagtgaagttaaagataatatttatgagtttgaaggt
gaagactattcaactgctacagagaaagataaagctgtttttgaagagttacttaatgat
gttttaaaattacaaggagaaagatcttcaagaaaagacacaaaaagttttgttgagctt
tcatttgttaagcaaaaaaaaagaaagcaaaaagaccttacaaatgaagaaaaagaagaa
ttggccaaaaagagagaagaaaacaaggctaaacgaataaaaatgcttgaagaaaaggca
aaagaaaaaattttaaagttatgggaaactcataaatacaattcatgcaagcttgaactt
ccaagttgtttagataatgaaaatccatcttttgaagtagaaagtgatgatgaagaacaa
gttagtcacattaactatgtagttggtgatgtcactaatcctcgacaagttaatcaaaga
gatgctattattgtccattgtgttgatgattctggttactggggacatggtggtttattt
tctgctattaataagcactcaaaacaaccaaaagagcaatatgaactggcttttaaaatg
aaagatttgcatctcggtgatgttcatcttataaatatgcaaaaaaccgattttgctatt
tatgttgcattgatagttgttttttcacgcgatcgcaacaaccagatttcaccaatgctg
ctcaactatttatctacttctttagagaaaattcatcatttagccaaagaaactggagct
agcgtacatctccctcgcatcggttataattctcctaattttaattggtatggaaccgaa
aggttgattaagaaaatattagctgatcaaaaagtacctacatatatttactattataaa
aagtttactcaaataaattcttcgtcaacggatcaactgactccgcatttagcaactgaa
agtaacgagtcaaagtttcatgtaaaagattctttgccggatattttttcgggtttagct
gtatactttcacgggttgaatgatttaacggaaatacgtcgactatcgagattcgtcatt
gcttatgatggcgaagtagatacaagtttaacgcctgacacaacgcatgttgtgaccacc
tcttgtggaaaacgatcgcttgattacatccctgacagtgtaaaggtagttgaaactggt
tggattgatgaatgttgcaaacaagaaaagttggtttctgaagatctttttatcgtaaaa
taa
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