Hydra vulgaris (swiftwater hydra): 101239717
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Entry
101239717 CDS
T01080
Name
(RefSeq) TBC1 domain family member 2B isoform X1
KO
K20166
TBC1 domain family member 2B
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
101239717
Membrane trafficking [BR:
hmg04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101239717
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
WD40_2
DUF7365
Curto_V2
Motif
Other DBs
NCBI-GeneID:
101239717
NCBI-ProteinID:
XP_047134791
LinkDB
All DBs
Position
6:32817338..32910494
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AA seq
1100 aa
AA seq
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MTSEEINEDLSGHLYIKTTNSSKIKNNKKQYCCHSLKDPNMVKQWVELNTQHNELHCFKN
NKEKQNPIEKLVLHGAGISFGKASENEFIINIRGCEYKCYAESHKLMVKWTNVLKKQITM
KPLNSESRALDVVPEDEILEVKDIKEENFKVEDKKKQGNFFNRLFNRISMRSTPKINTPD
TISKNKKVVKPAPLRTVVGSMQDISNKPVTCSTCQSFQARNIYLTEQVSHLNEDIENLKD
QMRTHARCTGIMERKQIHLKIEFVQFLQNSLVNDTNLYVSVADVPSSRLVFKLLQEEHAK
DQSIPCFDNDFITNPHVDHLGFLHLKSEGPIETLLYLCEILKFAMSSQLQADDEQYQRWL
LFSAHSKSKTYILDDPDLADLIQYGIPHQFRAQIWQQLIENHVANIQVEKGSDYYLKLVD
RLSDIQKIETEDDEPIEKQIKIDLLRTMPMHQDFRALDQPKVATLHRILRAFLLHNKDVG
YCQGMNFMVAFGLLYLDEETTFWLLVAITEVYFPKHHYNLYLSGTQASQRVFSHLCEELN
PELIRHLESLNCELAPITFNWFMTIFFDALPVNVVLNIWDCFLFYGHKILYPFALSLIKL
QKKKILSCKETLSAMRKLKAFGKMFYDVESLLKEVFDRNFEKDFNLYNELYVKYLKDIEE
ESLKRKLEDEEYEKKKQKLKFTPKPMMVSVAENLDELDDDLIIKCVQCEENHNYVWILGT
SDLKGQVFVLNVSSRTTVPIDWQVDCRCIAMCRLETCNIMLVSTMKSMLHAIDIETKKEI
WSVQLAGCALSISCDMHGNVALTLMDGTIAFFNLTSQSDTEVEPSYIDISSSPVFTGCIV
GDSFWCGAANKIVVMEMKTLETKISLRVCPRERHTVSQLVLTDIGVWCSVISSSVVHLWD
KVNYYCLLTVDILVECGLASEKKTSQKGDLGITTIMAFRDKLWVGFGNGRFIINDVFIKN
TEDDLNDVISHFKSIPQSTLGVPTATSKLSVNTCCHDIDGDNEFLEETRSRSQSTSYREF
GGVRSSQIDIDSHVEYSVKMNQIQRVSENRVSCFIPCRNDNRLVLSCMGALNDDSSVILW
SSEKHDGREMWFAQTVSYSL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagaagaaataaatgaggatttgtctggtcatttgtatataaagacaacaaac
tcaagtaaaatcaagaacaataaaaaacaatattgttgtcactccttaaaagacccaaac
atggtcaaacaatgggtagaactgaatactcaacacaatgaacttcactgttttaagaat
aataaagagaagcaaaatcctatagagaaattagttttgcatggggctggcatttcattt
ggaaaagcaagtgaaaatgagttcattatcaatattcgtggctgtgagtacaaatgttat
gcagaaagccataagttaatggtgaagtggacaaatgtactcaaaaaacaaattacaatg
aagccattaaacagtgaatctagagcgttagatgtagttcctgaagatgaaatcttagaa
gtcaaagatattaaagaagaaaattttaaagttgaagacaaaaaaaagcaaggaaatttt
tttaatcgtctatttaatcggatttcaatgcgatcaactccaaaaatcaacacacctgat
actatcagcaaaaataaaaaagttgttaaacctgcaccattgcgaactgttgtaggatcc
atgcaagacatatctaacaaaccagtaacttgttcaacctgtcaaagttttcaagcaaga
aatatttatctaacagagcaagtatcacatctcaatgaggatattgagaacttaaaagat
caaatgcgtactcatgctaggtgtactggtatcatggaaagaaaacaaatccatttaaaa
attgaattcgtacaatttctgcaaaattctctagtcaacgataccaatttatatgtaagc
gtagctgatgtaccaagcagtcgattggtttttaagttacttcaagaagaacatgccaaa
gaccagagtattccttgtttcgataatgatttcattacaaacccgcatgtagatcatctt
ggttttcttcatttaaaaagtgaaggaccaattgaaacattgttatatctctgtgaaata
ttaaagtttgcaatgagttcacaattacaagcagatgatgaacaatatcaaaggtggtta
ctctttagtgcgcattctaaatctaaaacttatattctagatgatcctgacttagctgat
ttgattcaatatggaataccccatcaatttagagcacaaatatggcagcagttgattgaa
aatcatgttgcaaatattcaagtagaaaagggtagtgattattatttgaagttggttgac
aggttgtcagatatacagaaaattgaaacagaagatgatgagcctattgaaaaacagata
aaaattgatcttctgagaacaatgcctatgcatcaagactttagagcccttgatcagcct
aaggttgccacattgcatagaattttgagagcatttttgctacacaataaagatgttggg
tactgtcagggtatgaactttatggttgcatttggattactttacctagatgaagaaaca
acattttggttgttagttgctattacagaggtatattttccaaagcatcactacaactta
tatctttctggaacacaagctagtcagagagtattttcccatctttgtgaagaattaaac
cctgaacttattagacatttggaaagtttaaattgtgaactggctccaataacctttaat
tggttcatgacaatattttttgacgctcttccagttaatgttgtattaaatatttgggat
tgctttttgttttatggtcataagattttgtatccttttgctctaagtttaatcaagctt
caaaagaaaaaaattctttcttgcaaagaaactttatcagcaatgagaaagctcaaagca
ttcggaaagatgttttatgacgttgagagtttattaaaggaggttttcgataggaatttt
gaaaaagactttaacttatacaatgaactttatgtgaagtatttaaaagatatagaggaa
gaaagtttgaaaagaaagttagaagatgaagaatacgagaaaaaaaagcagaagttgaaa
tttactccaaaacctatgatggtttctgtagctgaaaatttggatgaattggatgatgat
ttgataataaaatgtgttcagtgtgaagagaatcacaattatgtatggatactgggcact
tcagaccttaaaggacaagtgtttgttttaaatgtatctagccgaactacagtacctatc
gattggcaggtagattgcagatgcattgcaatgtgcaggcttgaaacatgtaatattatg
ttggtatccaccatgaaatcaatgctacatgctattgatattgaaacaaaaaaagagatt
tggagtgtgcagttagctggttgtgcattaagtatttcatgtgacatgcatggaaatgta
gcattaacacttatggatggtacaatagctttttttaatttaacgagtcagtcagatacc
gaagttgagccaagttatattgatatcagcagttcacctgtgttcactggatgcattgtt
ggtgatagtttttggtgtggggctgcaaacaaaattgttgtgatggaaatgaaaacactt
gaaacaaaaatatcattacgtgtatgtcctagagaaagacatacagtatcacaattggta
ttaactgatataggggtctggtgctcagtaattagttcttcagttgttcatttatgggat
aaagttaattattattgcttacttactgttgatattttggtagaatgtggactggcttct
gaaaagaaaacaagtcaaaaaggtgatttaggaataactacaataatggcttttcgtgat
aagctatgggttggatttggaaatggtagatttatcatcaatgatgtctttattaaaaat
acagaagatgatctaaatgatgtcatatctcattttaaaagcataccacaaagtactctt
ggtgtaccaacagctacttcaaaactttctgttaatacatgttgtcatgatattgatggt
gacaatgagtttttagaagaaacccgaagtagatcacaatcaaccagttatagagaattt
ggaggtgtacgctcttctcaaatagatattgatagtcatgtagaatattcagtaaaaatg
aatcaaatacaaagagtttcagagaacagagtgagctgttttatcccatgcaggaatgac
aatcgattagttttgagttgcatgggcgcattaaatgacgattcttctgttattctttgg
tcttcggaaaaacatgacggtcgtgaaatgtggtttgcgcagacggtttcttattcgtta
tga
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