Hydra vulgaris (swiftwater hydra): 101239914
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Entry
101239914 CDS
T01080
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmg03400
]
101239914
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101239914
DNA repair and recombination proteins [BR:
hmg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
101239914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
101239914
NCBI-ProteinID:
XP_047145724
LinkDB
All DBs
Position
12:complement(11384715..11475401)
Genome browser
AA seq
2143 aa
AA seq
DB search
MVDLPRFTGSLKPATLEWNSPIVQIKLREELQQKRKLVKVTNGLTWKELKCAHNQNNSKK
SQLLKELFECAKDMVGRDTTQEALEESSAFLFEALKDTTSISSLESLKLQQVFGPFPATL
ATKAFECVQQLSYILSKESDESSGTDKLNSDYFGHNIKLDFDFYDTNFENLYEEYEIESR
TSVSSGDSFVQHFRDTLLLHQNVDLEKQVCQNNLSSSWLQDQCDVYVKTNPGSICSSDLA
SAIYDILATSKSNDEIQNDLFDLVGFDAFDLILNLLEKRKEIIDAGSVKKSGTNNVTEFQ
YIDPVHKLRKPLLGSQVTIHSELEKDFVKKMHKEERKLLRKDPELYKEIYNQNCNELQNI
QSQPLFKRDTTTSSQQYPFVFDEFAIKKHTSSFVGGSKILLPESATKSSNKKYEEIDIPA
SASKLPDYLNIFVEIKNLDEVGQIVFRNIKKLNRIQSIVFDAAYNTNENLLVSAPTGAGK
TNIALLAVTHEIKQNMEMGVVKKDAFKIVYVAPMKALASEMTETFGKRLQPLGIVVRELT
GDMQLTKKEIQETQMLVTTPEKWDVVTRKGFSDVALSQIVRLLIIDEVHLLHDDRGAVLE
ALVARTLRQVESTQSMIRIVGLSATLPNYTDVAKFLNVNPLKGLFYFDGRFRPVPLRQTF
IGIHATGFLQFTKDLNEVCYKKVHENVRNGKQVMVFVHARNATVKTAMTLREMAKNEGEI
ADFEPDKNAQYSIMEKKVMRSRNKQLKEMFPDGFGIHHAGMLRQDRNTVEELFSKGFIKV
LVCTATLAWGVNLPAHAVIIKGTELYDAQKGSFVDIGILDVLQIFGRAGRPQYDSSGHGI
IISKYDKLSHYLQLLTQQTPIESQFVNSLTDNLNAEVSLGTVTTVDEAVKWLSYTYMYVR
MRINPLVYGINYREKEEDPLLEKHRLDLIKISARKLDKAKMIRFDERTNFLYPTNLGRTA
SNYYIDFPTIEVINEFFKPVMDVGEIFSVVSKAHEFNQIKVREDEVIELEEHLNESCVTP
VKGGTDTEYGKVNILLQTYVSKAQLESFSLISDMSYVAQNATRIVRALFEISLQNNWAIM
AKRLLTLSKVVEKQLWEWEHPFKQLEGIKFELLVKLEQKKLTVDMMREMDAKEIGLIVNH
VSMGSTLKSCAFQIPRVQLGASIHPITRTVLRLNLKVIPDFEWNDKYHGKVAEPWWIWVE
DPDTDNIYHSEYFLLSRKSVKQKEEQSLVFTIPIFEPLPPQYYVRAVSDRWLHSEAVVAI
SFKHLILPDLHPPHTELLNLQPLPVTVLRNSQLEMLYSFSHFNPIQTQLFHTLYYTDSSV
LLGAPTGSGKTIAAELALFRVFREYPKAKSVYIAPLKALVSERMADWKVRIEQKLKKKVI
ELTGDVTPDIRSIGIADVIVTTPEKWDGISRSWQTRQYVKDVALVIIDEIHLLGGDRGPV
LEVIVSRTNFISSHTSKKCRVIGLSTALANAKDLADWLGIGQEGLFNFRPSVRPVPLEVH
IAGYPGKHYCPRMATMNKPCFKAIQTHSPEKPVLIFVSSRRQTRLTALDLIAYLAGVSNP
KQWMKMLEQEMNDLISTVHDQTLKLTLSFGIGLHHAGLHERDRKMTEELFVNQKIQVLIA
TSTLAWGVNFPAHFVIIKGTEYYDGKTKRYVDFPITDVLQMMGRAGRPQYDDHGVALILV
QDIKKNFYKRFLYEPFPVESNLLEVLPDHLNAEIVASTITSKQDAMDYMTWTYLFRRILM
NPTYYGLDDTNHNSINAFLSKNIEKSIYELQSSYCVEVKEDDNTIEPTILGRISSYYYLS
HLSMRMFKSRLCSELSIEDVLQVLCDAQEYDQLPVRHNEDKLNGELAELVPLQVNKYTLD
SPHTKTHLLLQAHFSRVELPIADYITDTKSVHDQSIRILQAMIDVCADEGYLVTVLQIII
LMQMTVQGCWYHGSALLMLPNVTSDMLPLFKINPRMKSDTPRQIVCIPELISYCAKTPKL
LHNMIGHVLKSNEIEKIYEVLSVLPIVSIKTSLFDDQSKGEQAIDLTQTNSNKREWLPIR
AGCEYALKISIKRDQLSPKRPTSKAYAPLFSKSKDEGWFFLLGEIDCKDILALKRVSFIH
KESTVNLGFYAPEDRGNKIFTLYLMSDSYLGMDQQYDLFFDVQ
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttgcctcggtttactggatcacttaaaccagctacattagaatggaattca
cctattgttcagataaaattaagagaagaactgcaacagaaacggaagcttgttaaagtc
accaatggattgacatggaaagagttaaaatgtgctcacaatcaaaacaactccaaaaaa
agtcaattgctaaaggaattatttgaatgtgctaaagacatggttggaagagatacaact
caagaagcattagaagaatcatctgcttttttgttcgaagcgctcaaagatacaactagt
atttcatctttagaatctttaaaacttcagcaagttttcggaccttttcctgctacactt
gcaacaaaggcattcgagtgtgttcaacagttatcatatatactatcaaaggagtctgat
gaaagtagtggaactgataaattaaactctgattattttggccacaatataaaattagac
tttgacttttatgatacaaattttgagaatttatatgaagagtatgaaattgaaagtaga
acatctgtttcctctggtgattcatttgttcaacattttcgtgacacacttttattgcat
caaaatgtcgaccttgaaaaacaggtgtgtcaaaataatctgagttcctcttggctacag
gaccagtgtgatgtttatgttaaaactaatcctggctctatttgttcctctgatttagca
tcagctatatatgatattttggctacatcaaagtcaaatgatgaaatacaaaatgatctg
ttcgatttagttggttttgatgcatttgatttgatacttaacctattagaaaaaaggaaa
gaaattatagatgctggctctgtaaagaaatctggtacaaacaatgtaactgaattccaa
tacattgacccagtacataaacttcgtaagcctttgcttggttctcaagtaacaatacat
agtgaacttgaaaaagactttgtgaaaaaaatgcataaagaagaaagaaaattgctacga
aaagatccagagttatacaaggaaatatacaaccaaaattgcaatgaacttcaaaatatc
caatcgcaacctttattcaaacgagataccacaacctcctctcaacaatatccatttgta
tttgatgagtttgcaattaaaaaacacacatcttcttttgtaggtggatctaagatatta
cttcctgaatcagcaacaaaaagtagcaacaaaaaatatgaagaaatagatatcccagca
tctgcctccaagctacctgattatttaaatatatttgttgaaataaaaaatcttgatgag
gttggacaaatagtttttcgcaatataaaaaaactaaatcgtatacaaagtattgtcttt
gatgctgcatataacaccaatgaaaatttattggtttctgctcccacaggagctggtaaa
acaaatattgcgttacttgcagttacacatgagataaagcaaaacatggaaatgggtgtg
gttaaaaaggatgctttcaagattgtttatgttgctccgatgaaagcattagcttctgaa
atgactgaaacatttggcaagcggcttcaaccattgggtattgtagttcgtgagttgact
ggtgacatgcagttaacaaagaaagaaattcaagaaacccagatgttagtgactactcca
gagaaatgggatgttgttacacgaaaaggttttagtgatgttgcgttatctcagattgtt
aggcttcttataattgacgaagttcatttacttcatgatgatcgtggtgcagttttggaa
gcacttgttgctaggacactaagacaggttgagtccacgcagagtatgatacgcattgtt
ggattatctgctactttgccaaactatacagatgttgccaagtttttgaatgtaaatcct
ttaaagggtttattttattttgatggtcgctttcgtccagttcctctccgacaaacattc
atagggatacatgcaacaggttttttacagtttactaaagatttaaatgaagtttgctac
aaaaaggttcatgaaaatgtgcgcaatggaaagcaggtcatggtttttgttcatgcaaga
aacgctacagtgaagactgcaatgactttgcgtgaaatggcaaagaatgaaggtgaaata
gcagattttgaaccagataaaaatgctcaatattcaataatggaaaaaaaagttatgcgt
tctagaaacaagcagttaaaagagatgtttccggatggctttggcatccaccatgcagga
atgttgcggcaagacagaaatacagttgaagaattgttttctaaaggttttatcaaagtg
cttgtatgcactgcaactttagcatggggagtaaatcttccagctcatgcagttataata
aagggaactgaactttatgacgcacaaaaaggttcttttgtggatattggtattcttgat
gttttacaaatatttggaagagctggtcgtcctcaatatgatagtagtgggcatggaatt
atcatttcgaaatatgataagctttcacattatttgcagttgcttacacaacaaacacca
attgaaagtcaatttgtaaatagccttactgacaatttaaatgctgaggtttcacttggg
actgtgacaacagtagatgaagcagttaaatggctaagctatacttatatgtatgttcgc
atgcgtatcaatcctctagtttatggtataaattatagagaaaaagaagaagatcctttg
cttgaaaagcatcgtctcgatcttataaaaattagtgcaagaaaacttgataaagcaaaa
atgattagatttgatgagcgcactaactttttatacccaacaaaccttggacgaactgct
agtaattactatattgatttccccactattgaggtaattaatgaatttttcaaacctgtt
atggatgttggagaaatattttctgttgtttccaaagctcatgaatttaatcaaatcaaa
gttcgtgaagatgaagttatagaattagaggaacatttaaatgaatcttgtgtcactcca
gtcaaaggtggcacagatacagagtatggaaaagtaaatatattattgcagacatatgta
tctaaggcacagctagaaagtttttcattgatatctgatatgtcttatgtcgctcagaat
gctactcggatagtgagagctctatttgagatatcattacaaaacaattgggctataatg
gcaaaacgtttgctgacactttctaaagttgttgaaaaacaactgtgggaatgggagcat
ccattcaagcaattagaagggattaaatttgagttgcttgtaaaattagaacaaaaaaaa
ctaacagtagatatgatgagagaaatggatgcaaaggaaattggtcttattgttaatcat
gttagcatgggatcaactttaaagtcatgcgctttccaaatccctagagttcagcttggt
gcatctatacatccaattactcgtactgtattgcggctaaatttaaaagtgatacctgat
tttgaatggaatgataagtaccatggcaaagtagcagagccatggtggatatgggtggag
gatccagacactgataacatttatcactctgaatattttttgctctctagaaaatctgtc
aaacaaaaggaagagcagtctttagtatttacaattcctatatttgaacctctcccacca
cagtattatgttcgtgctgtctctgatcgttggttgcattctgaagcagttgttgccata
agttttaaacatcttattttgccagatcttcatcctcctcatacagaactattaaatctt
caaccattgcctgtcacggttttgcgcaattcccaattggaaatgttgtatagtttttca
cacttcaatccgattcaaactcaattatttcatacattatactatactgatagcagtgtg
cttcttggtgctccaactggaagcggtaaaacaatagcagctgaattagcattgtttaga
gtatttagagaatacccaaaagctaaatctgtttacattgcacctctcaaagctttggta
agtgaaagaatggcagattggaaagtgagaattgaacaaaaattaaaaaaaaaagttata
gaactgactggtgatgttactccagatataagatccataggtatagcagatgtcattgtg
acaacacctgaaaaatgggatggcatcagtcgaagttggcagacgcgtcagtatgtcaaa
gatgttgctctagttattattgatgaaattcatttacttggtggtgatcgaggacctgtt
ttagaagtaatagtttcaagaacaaattttatatcaagtcacacatctaaaaagtgtcga
gttatcggactttcaacagctcttgcaaatgcaaaagatttagctgattggttaggaata
ggacaggaaggcttgtttaattttcgaccatctgttcgtccagtacccttagaggtgcat
attgctggatatcctggaaaacattactgtccacgtatggctacaatgaataaaccctgt
tttaaagcaatacaaactcactctcctgaaaaacctgttctcatttttgtttcttccaga
cgacaaacaagactgactgctttagatttaattgcctatttagctggtgtaagcaatcca
aaacagtggatgaaaatgttagagcaagaaatgaatgacttaatcagcacagttcatgat
caaacattaaagttaacattgtcatttggtattggtcttcatcatgctggacttcacgag
agagatcgtaaaatgacagaagaactttttgttaatcaaaaaatacaggtgctgatagca
acatcaactcttgcatggggagtaaattttcctgcacactttgtaattattaagggaact
gagtactatgatggaaagacaaagcgttatgtagattttccaatcacagatgttttgcaa
atgatgggtagagctggtcgtcctcagtatgatgatcatggtgttgcacttattttggtc
caagatattaaaaaaaatttttataaaagatttttgtacgaaccttttccagttgaatct
aatttgttagaagtgcttcctgaccatttaaatgctgaaattgttgccagcactatcaca
tcaaaacaagatgcaatggattacatgacctggacttacttattcagacgaatacttatg
aatcctacttactatggattagatgatacaaatcataattcaataaatgcatttttatca
aaaaatattgaaaagtcaatttatgaactgcagagttcatactgtgttgaggttaaagag
gacgataatactatagaaccaacaattcttggtcgaatttcttcgtattattatctaagc
cacttatctatgagaatgttcaaatctcgcctttgctcagaactctcaatcgaagatgta
ttgcaggttctgtgtgacgcacaggaatatgatcaactacctgtcagacacaatgaagat
aaattaaacggtgaacttgctgaattggtaccactgcaagtgaataaatataccttggat
agtcctcacactaaaacacatttacttttacaagctcatttttctcgtgttgaacttcct
atagctgattatattacagacacaaaatcggttcacgaccaatctattcgtattttacaa
gcgatgattgatgtttgtgctgatgaaggttacttagtgacagttctgcagattattatt
ttaatgcaaatgacagtacaaggttgttggtatcacggtagcgctttgttgatgcttcca
aacgttaccagtgacatgctaccattatttaaaataaacccaagaatgaagtcagataca
cctcgtcaaatagtttgtataccagaactaatcagttattgcgctaaaacccccaagttg
ctccataatatgattggacatgtattaaaatcaaacgaaattgaaaaaatatacgaagtt
ttgtctgttttaccaatcgtatctataaaaacatcattgtttgatgatcaatctaaagga
gaacaagcaatcgacttaactcaaaccaattcaaacaaacgagagtggcttccgattcgc
gctggctgcgagtatgctctgaaaattagtattaagagagatcagttaagtcccaagaga
ccgacttcaaaagcatacgctcctttgttttcaaaatcaaaagatgaaggatggttcttt
ttactcggagaaatagattgtaaagacattcttgctctcaaaagggtatcttttatacac
aaagaaagtactgtaaatcttggtttttacgcacctgaagaccgtggaaataaaattttt
acattatacttaatgagtgatagctatcttggtatggaccagcaatatgatctgtttttt
gatgtgcaataa
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