Hydra vulgaris (swiftwater hydra): 101240051
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Entry
101240051 CDS
T01080
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101240051
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hmg01009
]
101240051
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
101240051
03029 Mitochondrial biogenesis [BR:
hmg03029
]
101240051
Protein phosphatases and associated proteins [BR:
hmg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101240051
Membrane trafficking [BR:
hmg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101240051
Mitochondrial biogenesis [BR:
hmg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101240051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
Nucleoprot-TPR
TBK1_ULD
HVO_2248
Motif
Other DBs
NCBI-GeneID:
101240051
NCBI-ProteinID:
XP_047122587
LinkDB
All DBs
Position
13:complement(12725216..12781343)
Genome browser
AA seq
1372 aa
AA seq
DB search
MALLHVFLVDTGLMMKLDMQLAAENVSVLMGSIYEKTFITPSNQVLITANGEPLNPEKCV
ASYVSVGTESHPIFLFSKSSIQSAIPPSPSINLGSEKSLKEEVDACAKMPPIYETLVTRA
KLASDFQKFAFELYESCENLVNDQNFQSLGWSAVIMNLDHITEAFHRHLMSFEEYYKGFF
SMKSHYSNMLLSFSKVLIWLEKLPLLPCLTSKSEKRSLLEWINTYDQQSSLENLLRQCQE
SIKQLNFEVYEKVVDDAQQILESAQNPNMKEIRGLADRLVNLQQRLHLANQLKQDQSDMA
QGFQQNKMRAEHLGDSSVLPDLCSSHQKQLHVLIKNHCHLREIRNLCARAKDELSVNLHT
RLKWVMTIEKQICSLNSKIVIYHDFLRKIKKRMDIFEQVYDAPKLYVLSVIEVVRRRHFS
KQFCEWAKSVAESSKVTRNEEIQRRQVFQQVFRQHFVQSLIPGLDRLPTPFAEDPPVSCD
YELPEIQVEDIQFIQQHVPDLVSEMNMSDIMLTSTQVQHCLSHDNLQKLAQEIPDVYFNE
TQFDQKLTMSALKREISAVNEEFPFYEDPPFRESTVNTDDESSDFDPVSLCSLADDKSDD
SDALFQSAEMDLSDNTTPVISPVLGKSSSVPIDIKLSSKSTHDELDFISDSPLSKNIFSS
NNVSSSSSPLIKSFKNLKNSSNNSLSLAKALKCTQVTNTQSTSLFLNALKEVLLLKSNLC
NAQTDFQIMYQDTNKDLSNFKEQFLAICDTVLRAKCENCLLLKQDIDKLIDENNQFKKNY
DKLSLESTNELLKAKVKASDLINKLEIEVKNSNTCIQDLQIQVENLNKNLDYLYSQEQKY
CNEKLQVCSELDKCKLELSTKSIEYESQITVVRNDISNLQNKLQTQENSFLQEQAILHSK
IQSKDIEMQKLNEIIFSLSEKIKENEDSYNSSINNYKCQIDTITAEHNKSLNEIAQLTNQ
LKDCQSKLVSTQGLLATAQSTLTTTQQTNESNLEHISVLNLQIKKLKQLLNEKHEEISQA
KNHLEFQKQLSFNQVVNKIKKDKDIQIQDAQARCTQFEKEIVLLKLKIDNLNQEITTHKD
GFSLYEDDVKKMKQTMMADIKNLKEEVNELKNSNKSLKHENEQLSCDNKKISAEVIRMSE
ENTRLTASVDEIAQEKLRVLQELKVQYNEALEKEKKSILLNFELEKESIMEKCGRSEHMI
RESSSLEEGIDELEVDRLVEKVKILEEENKKLKNSIDNEKNIKNKLVLESLWKEKITWKK
ISIGDAIIVAYDESIKQYVALSDQTCFVHPESLKQIFNASSQKQFPYDETELLSKSTKSG
FVSYYKEAYICWMLVYVTNTELCLAKKSGNKFNLPVDTMFLRIHVMLYTDPK
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgctgcatgtttttctggtggatactggtttaatgatgaaattagatatgcag
cttgctgctgaaaatgtatctgtactaatgggatctatatatgaaaaaacatttattacg
ccgagcaatcaagtcttaattacagctaatggagaacctcttaatcctgaaaaatgtgtt
gcaagttatgtcagtgtaggaacagagagtcatccaatatttttgttcagcaaatccagc
attcagtcagcaattcctccgtcgcctagtattaatttgggatcagaaaagtccttaaaa
gaagaagttgatgcttgtgcaaagatgcctccaatatatgaaaccttagttacaagggca
aaacttgcctcagattttcaaaagtttgcttttgaattatatgagagttgtgagaattta
gtaaatgatcaaaactttcaaagtcttggatggtctgcagttataatgaacttggatcac
ataaccgaagcattccatagacacttaatgtcatttgaagaatactataaaggatttttt
tctatgaaatctcattatagcaatatgctgctcagttttagcaaagtattaatttggcta
gaaaaactgcccttgttaccttgtctcacttctaaaagtgaaaagcgatctttacttgaa
tggataaacacctacgaccagcaatcttcacttgaaaatcttttacgacaatgccaagag
tcaattaaacaactaaattttgaagtttatgaaaaagttgtagatgacgctcagcaaata
cttgaatcagcccaaaatccaaacatgaaagaaataagagggttggctgatcgcttagtt
aatttgcagcaacgtttacatcttgcaaatcaactcaagcaagatcaaagtgatatggct
cagggttttcagcaaaataaaatgcgagcagagcatctgggagattcttctgtattacca
gatttgtgctctagtcatcaaaaacaattacatgtcttaataaaaaaccactgtcattta
agggaaatacgtaatctatgtgcacgtgccaaagatgagctctcagttaatttacacact
agattgaaatgggtgatgacaattgaaaagcaaatctgtagtttaaacagcaaaattgtc
atatatcatgattttttgagaaagattaaaaaaagaatggacatttttgaacaagtttac
gatgcaccaaagttgtatgtgctttcagtaattgaagtagttagaagaagacatttttca
aaacagttttgtgagtgggcaaagtcagtagctgagagttctaaagtaacacgaaatgaa
gaaatacaaaggcgacaagtttttcaacaggtttttcgacaacattttgttcagagtttg
attcctggattagatagattacctactccctttgctgaagatcctcctgtaagttgtgat
tacgagcttccagaaattcaagtagaagatattcaatttattcagcaacatgtaccagac
cttgtgtcagaaatgaatatgtctgatattatgcttactagcacacaggttcaacattgt
ttatcgcatgacaatcttcaaaagctggcccaggaaatacccgatgtatatttcaatgaa
acgcaatttgatcaaaagttaaccatgagtgcattgaagcgtgagatatcagctgttaac
gaagaatttccattttatgaagatcctccttttcgtgaatcaactgtaaatactgatgac
gaaagttcagattttgatccagtttcactatgctctttagctgatgacaaatcagatgat
agtgatgctttatttcaatcggctgaaatggatttgtcagataatacaactccagttata
tctcccgttttaggaaaatccagttcagtgccaatagatataaaactatcttccaaatca
actcatgatgagttagactttatctcagattcaccattatcaaaaaatattttttcttct
aacaatgtttcttcatcttcatctcctctaataaaatcatttaaaaacttaaaaaatagt
tctaacaacagtctctcactggctaaagctctaaaatgtacccaagtaacaaatactcaa
tcaacaagtttgttccttaatgctctcaaagaggttttgttacttaaatccaacctttgt
aatgctcaaacagattttcaaattatgtatcaagacactaacaaggacttgtccaatttt
aaagaacagtttcttgcaatttgtgacactgttttacgcgcaaaatgtgaaaattgctta
cttttaaaacaagatattgacaaactcatcgatgaaaacaatcaattcaaaaaaaactat
gataaattaagtttagaaagtactaatgaacttctaaaagcaaaagttaaagctagtgat
ttaattaataaacttgagattgaggtaaaaaattctaatacatgcattcaggatttacaa
attcaagtggaaaatttaaacaaaaatctagattatttgtacagccaagaacaaaagtat
tgcaacgaaaagttgcaagtatgtagtgaacttgataagtgtaaattagaactctcaact
aagtctatagagtatgagagtcagataactgtagtaaggaatgatatatctaaccttcaa
aataaacttcagactcaagaaaatagtttcttgcaggagcaagcaattctgcattctaaa
attcaaagtaaagatatagaaatgcaaaaactaaatgaaataatattttctctttctgag
aaaataaaagaaaatgaagatagttacaattcatctataaataattataaatgtcaaatt
gatacaattacagctgaacacaataaatcgcttaatgaaattgcacagctcactaatcag
cttaaagattgccaaagtaagctagtttcaacacaaggtttgttagcaactgcacaaagt
accttaacaactactcagcaaacaaatgagtctaacctagaacatatttcagtactcaat
ttacaaattaaaaaactgaaacagctgctaaatgaaaaacacgaagagatttcacaagct
aaaaatcatctggaatttcaaaagcagttaagtttcaaccaagtagtcaataaaattaaa
aaagataaagacattcaaattcaagatgctcaagctaggtgtacacagtttgaaaaagaa
atagttttgttgaaattaaaaattgacaacttgaaccaagaaataactactcacaaagat
ggttttagtttatatgaggatgatgttaaaaagatgaagcaaaccatgatggcagacata
aaaaacttaaaagaggaagtaaatgagttaaaaaattccaataaatcattaaagcatgaa
aacgagcaactttcatgtgataataaaaaaatttcagcagaagtaattagaatgagtgaa
gaaaacactcgtttaactgcttctgtagatgaaattgcacaagaaaagttgcgtgtccta
caagagttaaaagtccagtacaatgaagcgttagaaaaagaaaaaaaaagcattttactt
aattttgagttagaaaaagaatccataatggagaaatgtggaagatctgagcatatgata
agagaaagcagctcattagaggaaggaattgatgaattagaagtagacagacttgttgag
aaagtcaaaattttagaagaagaaaataaaaagctaaagaattcaattgataatgaaaag
aatataaaaaataagttggtcttagagtcattgtggaaagaaaaaataacctggaagaaa
atatcgattggagatgccatcatagtggcttatgatgaatcaattaaacaatatgttgct
ttatctgatcagacttgttttgtgcatcccgaaagtttaaagcaaatatttaatgcatct
tcacaaaagcagtttccctatgatgagaccgaactgctttcaaaatcgacaaaaagtgga
tttgtctcttattataaagaagcctatatatgctggatgttggtttacgtgactaacact
gaactctgtttggctaaaaagtctggaaataaatttaatttgccagtggacactatgttt
ttgcgaattcatgtcatgttgtatacagatccgaagtag
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