Hydra vulgaris (swiftwater hydra): 101240404
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Entry
101240404 CDS
T01080
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101240404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
101240404
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
101240404
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
BCS1_N
Motif
Other DBs
NCBI-GeneID:
101240404
NCBI-ProteinID:
XP_047131015
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All DBs
Position
1:36237206..36307946
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AA seq
994 aa
AA seq
DB search
MVNEEEPSHLVCIIDVAKSKQSFEEICHSIDADSVFLEEAWSVYEKLIQNITLEGDSLHW
LTCAYYITYIKTTLLPGQVKADRPSLHLSNLLGKVKLSLLQFFQKVRSFLEMVKYEIDIN
QKIDQLERNFSVSSIVFEKYLTIFKSIYNEDWIKSLKSPQKGEPLTSKDIRDFCWCLYIQ
VKAQYPDISDDLVNSYHLLLCCIDLVFANTLSSKKLKSSINKTYNGLPEGFLDRDYSACE
IPSILDNLCNTHEGLAIETKVIKRQYLGKFLEDLLKDNVLQGNFEQKTQLLSSKNFDINL
KQLNTMYQKRIIKSGEIDERIFIKDDSTLCIGTPTKRITVFTNTDQKARSQVKKNLQDYF
NKAKGFPPETPLTGRQWLSANIDSPCEPTITTSVSKLQELLNGLKASPSNNLKSLFDDQV
KAEEKLKSIIAEYSTIFLNAYVKPMESSADALSEISDENINKDFAKTRLHLAVVLFYKIL
EDFFVEEKKKSAADLSVLLDQEVFMKCLFTCSLEIVIFSYNSSRVFPWILKTFDLYPFHF
FKIIELVIRGQDLSRDVIKHLSKIEEQILETLSWKSGSPVFTAIESHGVPICQEVAPDHC
VSAPMFFISPTSLRLNKDGVEQSPIISIRDRFSLPVSASPAKRNLFGSSLQNETQSVVSL
SSQHFSASATVPASPKVSAGPLSTVRFPIMLPSPGSSPLRLIAVTSRNVDAQSSVMKPNT
KKYGSLGIFFRKLYHMLSMRMKDLCEKLDIGLELQKKIWTCFEHSLVSNIDMLRDRHVDQ
LLMCAIYIMSKVTNEDKSFREIMKWYRTQPQASSDVYRRVLIKSSKEKSETINKVSSDEP
AQTKHEEISLKHEENTEEIDVYDDLIQFYNIIYIKKIKDFALKFATNKSLLESPSLSPLP
ISRRQVYSPRKVSKQHEVYISPRKPTPQMTPSKILYCFDSDSPQKLDEINAMIKGGTRRK
VALDEDESIPAKRLNNGLAKRAQELRQEQSKITG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgaagaagaaccttcccaccttgtatgcataatagatgttgctaaatcgaag
cagagttttgaagaaatatgccattccatagatgctgacagtgtttttcttgaagaagct
tggagtgtctatgaaaaattaatacaaaatattactttggagggagacagtttgcattgg
ttaacgtgtgcttactacataacttatataaagacaacattattacctgggcaagtaaaa
gctgatcgtcctagtttacatttatcaaatcttcttggaaaagtaaaactaagcttgttg
cagttctttcaaaaggtgcgtagttttttggaaatggtgaaatatgaaattgatatcaat
caaaaaattgatcaactggaacgtaacttttcagtatcatctatcgtgtttgagaaatat
ttaacaatatttaaaagcatttataatgaagattggataaagtctcttaaaagcccccaa
aaaggagaaccattaacttcaaaagatatacgtgatttctgttggtgtctctatatacaa
gtcaaagcacaatatcctgatatcagtgatgatcttgttaattcatatcatttgcttctg
tgctgcattgatttagtatttgcaaacactttaagttcaaagaagttaaaatcatctatt
aataaaacatataatggtttgccagaaggctttttggacagagattattctgcttgtgaa
attccatcaatacttgataatttgtgtaatactcatgaaggtttagctatagaaactaaa
gttatcaaacgacagtaccttggtaaatttttggaagatcttttaaaagacaatgtttta
caaggcaattttgaacaaaaaacgcagttgttaagttcaaaaaatttcgatataaatctc
aaacaattaaacaccatgtaccaaaagcgcatcatcaaatctggtgagatagatgaaagg
atttttataaaggatgattctactttgtgcattggtactccaacaaaacgaataactgtg
tttactaatactgatcaaaaagcaagatctcaagtgaaaaagaatttacaagattacttt
aacaaggcaaaaggttttcctccagaaacacctttaactggaagacaatggctatctgca
aatatagatagtccttgtgaaccaactattactacttcagtaagcaagttacaagaactt
ttaaatggtttaaaggcatcaccttccaataatttaaaatctctttttgatgatcaggta
aaagcagaagaaaaattaaagtcaattattgcagaatattctacaatctttttaaatgcg
tatgtaaagcctatggaatcatctgctgatgctttatcagaaatttcagatgaaaacatt
aacaaagattttgctaaaacaagattgcatttggctgttgttctgttttataagatttta
gaagatttctttgtagaagaaaagaaaaaatcagctgctgatctatcagttttattggac
caagaagtatttatgaaatgtctctttacatgcagtcttgaaattgttattttttcctac
aatagttctagggtatttccatggattctaaagacatttgatttatatcctttccatttt
ttcaagattattgaattggtcattcgtggtcaagatctttcaagagatgttataaaacac
ctgagtaagattgaagaacaaattcttgaaactttaagttggaaatctggatcacctgtt
ttcactgccattgaatctcatggtgtgcctatctgtcaagaggttgctcctgatcactgt
gtcagtgcgcctatgttttttatatctcccacaagtttaagactgaataaagatggtgtg
gaacagtcacccattatttcaattcgagaccgattttctttaccagtttcagcaagtcca
gcaaagcgtaatttatttggttcatctcttcaaaatgaaacccaatcagttgtttcgtta
agttctcagcattttagtgcaagtgctactgttccagcttcgccaaaagtttcagcaggt
ccgctttcaacagtgaggtttccaataatgttgccttcacctggatcaagtcctttaagg
ttgattgctgttacttcacgcaatgttgatgctcaatctagtgtaatgaagcctaacaca
aagaaatatggatcattgggtatattttttcggaaactgtatcatatgcttagtatgcga
atgaaggatttatgcgagaagttggatatagggcttgaactgcagaaaaaaatctggaca
tgctttgaacatagtttagtttcaaatattgacatgcttcgtgaccgccatgttgatcag
ttgctcatgtgtgctatttatataatgtctaaagttacaaatgaagataaatcttttcga
gaaattatgaaatggtatcgtactcaacctcaagcatctagtgatgtatatagaagagtt
ttaataaaaagcagtaaggagaaaagcgaaacaattaacaaggtatcatcagatgaacca
gctcaaacaaagcatgaagaaatttctttgaaacatgaagaaaacacagaagaaattgac
gtttatgatgatctaatacagttttataacataatatatataaagaagattaaagacttt
gcgttaaaattcgctacaaataagtctttacttgagtcgccatctttgtcgccattgcct
ataagtcgtagacaagtatattctcctcgtaaagtttctaaacaacacgaggtttacata
tcaccaaggaaaccaacacctcaaatgactccaagtaaaattttatactgctttgattcg
gattcccctcaaaaactagatgaaataaacgcgatgatcaagggtggaactaggcgaaag
gttgcgcttgacgaagatgaaagtatacctgctaaacgacttaataatggtttggctaag
cgagcccaagagctacgacaggaacaaagtaaaatcacaggttag
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