Hydra vulgaris (swiftwater hydra): 101240838
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Entry
101240838 CDS
T01080
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
101240838
Enzymes [BR:
hmg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
101240838
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Other ribosome biogenesis factors
101240838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
Methyltransf_31
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
101240838
NCBI-ProteinID:
XP_047123929
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All DBs
Position
14:complement(1876040..1939251)
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AA seq
510 aa
AA seq
DB search
MSFIKLYNAASDVVEKALKKESSIKSLCFSSRFQNKKLLFALVTETLKHHKILSMVLKVY
PDLWKEFDKKPSSSLQLVLVYETLLGKGVPSKHPYGKVLQNNLASLNDIWLKKKKEHPKL
LSCAFKKNVLPRYVRVNILKVSSEKVIERLKNDGKILVKDKKYNDLSVNEFCVDKDIPDL
LVFESRTDFHKNLMYINGEILLQDKASCLPAFILNPPMGSMIIDACAAPGNKSSHLASIT
RNKSHIFSFDLDFNRLKLMQKLLKKSACTSVKTKHQDFLRVQHCHPLYSKVEYILLDPSC
SGSGIVSRMDEFLDNEESTFTNDSRLKALSGFQTAALSHALQFPNVKKVVYSTCSVHKEE
NEDVVEKAYNRFKETFHLCHAFPEWSNRGLGEWEQAYKCIRAVPTIDYTNGFFVALFERS
NHHDVNLVNEFKNPQTGNELHETKDFLSKDIKFIGGMKSEVKKKKLKRKNLLSEIRGEPF
VCKKKKKKRSTSIKHPIAYPTCTKHPIKAP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagttttataaaattatacaatgcagcatcagatgttgtcgaaaaagccctcaagaaa
gaatcttcaataaaaagcctttgcttttcaagtcgttttcaaaataagaaattgttgttt
gctttggttacagaaacattaaagcatcataaaatattgagtatggtgttaaaagtttat
cctgatctctggaaagaatttgataaaaagccatcaagttcacttcaattggttcttgtg
tatgaaacacttctcggtaaaggtgttccatctaaacatccatatggtaaagttcttcaa
aataacttagcaagtttgaatgatatttggttaaaaaagaaaaaagaacaccctaaacta
ctatcttgtgcttttaaaaaaaatgttttacctcgctatgtaagagtgaacattttaaaa
gtaagcagtgaaaaagtgattgaaagattgaaaaatgatggcaaaatattagtaaaggat
aagaagtataacgacctcagtgtaaatgaattttgtgtagataaagatatccctgattta
ctggtctttgaaagtagaaccgattttcataaaaatttgatgtatataaatggcgaaata
ctattgcaagataaggctagttgcttgccagcttttattttaaatccaccaatgggttct
atgataattgatgcatgtgctgctcctggtaataaatcttcacatctagcaagtattact
cgcaataaaagtcatatattttcatttgacttggattttaatcgtttaaaacttatgcaa
aagttgctgaaaaaatctgcatgtacatctgtaaaaacaaaacaccaagattttcttagg
gtgcaacattgtcatcctttatactcaaaagtagaatatattttgttggatccatcttgc
tcaggtagtggaattgtttcaagaatggatgaatttttagataatgaagaatcgactttt
acaaatgatagtagattaaaggcactttccggctttcaaactgctgctttgagtcatgca
ttacaatttccaaatgtgaagaaagttgtttattctacttgctctgttcacaaagaagaa
aatgaagatgtggttgaaaaagcctataatcgctttaaagaaacttttcatttatgccat
gcttttcctgaatggtcaaaccgaggtttaggggaatgggaacaagcttataaatgcata
cgtgctgttcctacaattgattatacaaatggattttttgttgctctttttgagcgttcg
aatcatcatgatgtgaatcttgtaaatgaatttaaaaatccacaaacagggaatgaacta
catgaaacaaaagattttctaagcaaagacataaaatttattgggggtatgaaatcagaa
gtgaaaaagaaaaaacttaaaagaaaaaatcttctttcagaaattagaggtgaacctttt
gtttgcaagaagaagaaaaagaaaagatctacgagtataaaacatcctatagcctaccct
acttgtacaaagcatcctatcaaagcaccataa
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