Hydra vulgaris (swiftwater hydra): 101241062
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Entry
101241062 CDS
T01080
Symbol
LOC101241062
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101241062 (LOC101241062)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hmg04131
]
101241062 (LOC101241062)
Membrane trafficking [BR:
hmg04131
]
Exocytosis
Others
Others
101241062 (LOC101241062)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101241062 (LOC101241062)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RapZ-like_N
Motif
Other DBs
NCBI-GeneID:
101241062
NCBI-ProteinID:
XP_012561330
LinkDB
All DBs
Position
12:complement(71456951..71506586)
Genome browser
AA seq
1081 aa
AA seq
DB search
MDDGKVTSENHVYSPFQLNKSFDKPLKIVNGTNVFDNGNVYEGTSGSDQPSSPNLISSSP
FSFSLKKLGNYSLPPSNTNLNSSLQSVQKMNDLQQENLNLKKEIEAKETKLSSTVKSIKQ
FWSPELKKERLARKEEREKNLELKEQLSIANTQIQEYKKTLEDLEHELNAQQQKSKNLMQ
KLEEQNKNTLYNNLKEQFDLQADKILSLSLINKSNEEKISLYTSEKKTLEDKIYQLQSQI
ENNSINMLNESQYISNNKKFEKQEEEISLLTLTLDELEAKYNELLEDNEEKNKCISDLEI
ILVDKEQKEQYHESVLIQLQTCRNTIESQEEEILKLKYDNAILRESERRNLESLSNLEKC
LTDKEMQITNISKEVQELRAREHNQIEHNKKTEELLLSKDKQFDILQKEVITFCLQSKMM
LELLQQKLQDNEMKLSDNSKDDEIKILNENVEQLSTKLKAAELQHSESVKKLSKVMEELG
DLKNRMSSKEKELKENQAKVEQLNTKLKTVELQNSESVKKLSKTMEELGDLKNKFASKEK
ALKEHQIKIEQLNTKLKTAELQNSESTKKLSKAMEELADIKDTSSLKEKELKEHQIKLSS
INDELSSKDAIILTCNEEIKELKNASLSFKKTVDALQADLSEKNSLIVRFKKEKETQLSK
TVSFVVYEDMKRECESLSSANLQQKKTLEDLQNNLKSALETNSKLESEIENYKIELVKIN
MEYTETKEQYKEFEQINNDLKRDLQDSRTKIENFEKQERRSLLISDKKKAEDNQIVKQLQ
DENTQKLNRIIELEKQVAEKGKQLALIKKTQNFEKEKQHLLVNEKLKTDIEVKNQVEELK
NEIAKNKERITVLEDALRESVNVVIECENISASKSEFSQFEKAITNIKNAFLIFLMSEKD
ALIRSMIATRKRHSDELQNIRVNNLLSSISEKDTQIAHFELSNSKIKRNEIIQLKKDKEK
LMEELKEQNNNRVSETNLDPNEDSILLELRDAPSEQVYEAVRHLCTNNSRLEFYIEEFWE
HTKDMCIELLHSIEEPPQKSAKFTKTEKLSKDELMKELKLVTDHSVNLKKYVYGLLSKLE
G
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggaaaagttacatctgagaaccatgtatattcaccgtttcaattaaataaa
tcttttgataaaccattgaaaatagttaatggtacaaatgtttttgacaatggcaatgta
tatgaaggcacatctggttctgaccaaccaagttctccaaatttaataagctctagccct
ttttcatttagtcttaaaaaactaggcaattattcattgcctccaagtaacacgaacttg
aattcttctttacaaagtgtacaaaaaatgaatgatttgcagcaagaaaacttaaatctt
aaaaaagaaatagaagctaaagaaactaagttaagttcaactgttaaaagtataaaacaa
ttttggagtccagaattaaaaaaagaaagattagcaagaaaagaagaacgagaaaaaaat
cttgagttaaaagaacaactcagcattgctaatactcaaattcaggagtacaaaaaaaca
ttggaagatcttgagcatgaactaaatgcacaacaacaaaagtcaaaaaacctaatgcaa
aagttagaagaacagaacaaaaatactttgtataacaatttaaaagaacaatttgattta
caagcagataaaattttatcattgagtttaataaataagtcaaacgaagaaaagatttca
ttatatacatctgaaaaaaaaactcttgaagacaaaatataccaacttcaatctcaaatt
gagaataactctatcaatatgttgaatgaaagtcagtatatctcaaacaataaaaagttt
gaaaagcaagaagaagaaattagtttgctaacattaactctagatgagttagaagctaag
tataatgagttacttgaagataatgaggagaaaaacaaatgtataagtgaccttgaaatt
attcttgttgataaagaacaaaaagaacagtatcatgaaagtgttttaattcagttacaa
acttgtcgtaatacaattgaaagtcaagaggaggagattttaaaattaaaatatgataat
gcaatcttaagagaaagtgaaagaagaaacctagaaagtttatcaaatttggaaaaatgt
ttaactgacaaagaaatgcaaataactaatatcagtaaagaagttcaagagttgcgtgca
agagaacataaccaaattgagcataataaaaaaacagaggagttactactttccaaggac
aagcaatttgatatacttcaaaaggaggtgattaccttttgtttgcagtctaaaatgatg
cttgaactcctacaacaaaagttacaggataatgagatgaaactaagcgataattctaaa
gatgatgaaatcaaaatactaaatgaaaatgtagagcagctgagtacaaagttgaaggca
gctgaattgcaacactctgaaagtgtaaaaaaattgtcaaaagttatggaagaattaggt
gatcttaaaaataggatgtcatcgaaagaaaaagagctcaaagagaatcaagccaaggta
gagcagttgaatactaagttaaaaacagttgaattgcaaaactccgaaagtgtgaaaaaa
ttatcaaaaactatggaagagttgggtgatcttaaaaataaatttgcttcaaaagaaaaa
gcactcaaagagcatcaaatcaagatagagcagttaaatacaaagttaaagacagctgaa
ttgcaaaactctgaaagtacaaaaaaactatcaaaagctatggaagagttggctgatatt
aaagatacatcgtctttaaaagaaaaagaactcaaagagcatcaaattaagttatcttcc
ataaatgatgaactatcaagcaaagatgctatcattctaacatgtaatgaagaaatcaaa
gaattaaaaaatgcatctttaagttttaaaaagactgttgatgcacttcaagctgattta
tctgaaaaaaactctttgatagttcgctttaagaaagaaaaagaaacacaactatcaaaa
actgtatcttttgttgtttacgaagacatgaagagagaatgtgaatctttgagttctgct
aatctacaacagaagaagactctagaagatcttcaaaataacttgaaatcagcattggaa
acaaatagtaaactagaatcagaaattgaaaattataaaatagaattggtgaagataaat
atggaatatacagaaacaaaagaacaatacaaagagtttgaacaaattaacaatgattta
aaaagagatctacaagattcaagaacaaaaattgagaactttgagaagcaagaaagaaga
tctttattaattagtgacaaaaaaaaagcagaagataatcaaatagtgaagcagttgcag
gatgaaaatacgcaaaagttaaatcgcattattgaattagaaaaacaagtcgcagaaaaa
ggcaaacagttagcattaataaagaaaactcagaactttgaaaaagaaaaacaacattta
cttgtaaatgaaaaattgaaaacagacattgaagtaaaaaatcaagttgaggaactaaag
aatgagattgcaaaaaacaaagaaagaataacggtattagaagatgctcttagagaaagt
gttaatgttgtcattgaatgtgaaaatatatcagcaagtaaatctgaattttctcaattt
gagaaagcaatcacaaatataaaaaatgcttttttaatatttttgatgagtgaaaaagat
gcactcattcgttcaatgatagcaactcgaaaaagacattctgatgaattgcaaaatata
agggtaaataatttgttatcttcaatctctgaaaaagacacacaaattgcacatttcgaa
ctgtcaaattcaaagatcaagcgtaatgaaattatccaattaaaaaaagataaagaaaag
ttaatggaagagttaaaagaacagaataacaatagagtttcggaaactaatctagatcca
aatgaagattcaatcttattagaacttcgtgatgctccttcagagcaggtatacgaagct
gtacgccatctttgcactaataatagtaggctagaattttatattgaagaattttgggaa
catacaaaagacatgtgtattgaattactacacagcattgaagagccacctcaaaaaagt
gcaaagtttacgaagactgaaaaactttctaaagatgaacttatgaaagaattgaagtta
gtgactgatcacagtgtgaatttaaagaaatacgtttatggattgctctctaaacttgaa
ggctga
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