Hydra vulgaris (swiftwater hydra): 101241437
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Entry
101241437 CDS
T01080
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hmg03036
]
101241437
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101241437
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
101241437
NCBI-ProteinID:
XP_047124778
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Position
15:5677110..5740605
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AA seq
627 aa
AA seq
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MFYPQGITLCKKEKLSLIWLAANYDPEKYKKMISAKDCENVNIARICHSIINPKFPFALR
LSAQLMLGTVRIYRTKTKILLYTAEQMMLKLSTILKEVNYKSCDLPVATLREDVITLPDF
LNCESIIDYTLGPLYLDANMLLHIREADFFPINNTPLQSPVKFEKHKNRETKFSSPLTVS
NRQISIEESIFSPSKTVIQLPGVEEFEGNDFGPAQAEFLHDLNFDHAPLLRPNYKKRLAP
LFENEEDLNLTKNKKDYFENVDRTLLRSPQIQRKDDLKTPLADTFLPLETDIDGLHNETD
YVTTLPTNFADETEVATVMVEKTVKGKKQNWNCNLVTPAEAIILKPNASNPKRKRKLFVD
DEIALSSQQIKSNLATPDTLLKTPIIAGTALPNAKSLFLCPSFISLSKNKKLKTWWDNNS
CWQKISLDDLILGEKLNHVSGETEILKSPEHLRRDDESLGSIEIARNASSSMRSLEQSAG
STLLVEKTPLNDDDPQMLFGMENMIDFNDMQHFSSPRISGIGALPNDIIVDLNDQPGLEP
VLEQDETLLETDNENQEMSKRFLGFQRKIQLAILHRPSVDFFDVFPTYCNSRKDIAIAFY
TALNLHRCGKITLNQKEIFGPITISSN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcctcaaggaattacactctgcaaaaaagaaaaactgagtttaatatggtta
gctgcaaactatgatcctgaaaaatacaagaaaatgatatcagctaaagattgcgaaaac
gtgaatattgctcgtatatgtcattcaataataaatccaaagtttccatttgctttacga
ctttcagctcaactcatgctaggtacagttcgaatctatcgaaccaaaacaaaaattcta
ttatatactgctgaacaaatgatgctaaaattgagtaccatattgaaagaagttaattat
aaatcatgtgacttgcctgttgctactttaagagaagacgtaattacactacctgatttt
cttaactgcgaaagcataatagattatactttaggtccattgtatttggatgctaatatg
ctgttacatataagggaagctgatttttttccaattaataatactcctttacaatcacct
gtgaagtttgaaaagcataaaaatagagaaacgaaatttagtagtccattaacagtaagt
aatcgacaaataagcatagaggaatcaattttctctccatcaaaaacagtaattcagttg
cctggtgttgaggaattcgaagggaatgattttggaccagctcaagctgagtttttgcac
gacttaaattttgatcatgccccattgttgagaccaaactacaaaaagaggttagctccg
ttgtttgaaaatgaagaggatttaaatttaacaaaaaacaaaaaagattactttgaaaat
gttgacagaacacttcttagatcaccacaaatccaaagaaaagatgacttgaaaactcct
ttagctgacacatttcttcctctggaaactgatattgatgggcttcataatgaaactgat
tatgttactacccttcccaccaatttcgctgatgaaactgaagttgcaactgttatggtg
gaaaagactgttaagggaaaaaaacagaattggaattgtaatcttgttactcctgcagaa
gctattattttaaaaccaaatgctagcaacccaaaaagaaaacgaaaactttttgttgat
gatgaaattgcgttaagtagtcagcaaattaaaagtaacttagcaacaccagatacactt
ttaaaaacaccgattattgcaggaacagcacttccaaatgccaaatcacttttcctatgt
ccatcatttattagtttatctaaaaataaaaagctaaaaacttggtgggataataactct
tgttggcaaaagatttcgttagatgatctcatcctaggtgaaaaactgaatcatgtttct
ggtgaaacagagattttaaaaagtcctgagcatttaagacgcgatgatgaaagtttaggt
agtatagaaattgctagaaatgcatcatccagcatgcgatctttagaacagtcagccggc
agcactttattagttgaaaagacaccactaaacgatgatgacccacaaatgttgtttggt
atggaaaacatgattgattttaatgatatgcagcatttttcaagccctaggatctcaggt
attggagcactaccaaatgatatcattgtagacttgaatgatcaacctggacttgagcct
gttttagaacaagatgaaactctcttggaaactgacaatgaaaatcaggaaatgtccaag
cgttttcttggctttcaaagaaaaattcaactagcaatattgcacagaccttctgttgat
ttttttgatgtttttccaacatattgtaacagtcgaaaagatattgcaattgctttttac
actgcactaaatttacatcgttgtggaaagataactcttaatcaaaaagaaatatttgga
ccaattactatttcgtcaaattaa
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