Hydra vulgaris (swiftwater hydra): 105845646
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Entry
105845646 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
105845646
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105845646
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105845646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
zf-C3HC4_3
SAP_RNF34_RFFL
Prok-RING_4
FYVE
Motif
Other DBs
NCBI-GeneID:
105845646
NCBI-ProteinID:
XP_047142112
LinkDB
All DBs
Position
10:6379181..6401471
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AA seq
349 aa
AA seq
DB search
MPPKICKDCYTKLGFFKKKFKCRQCKGDYCEPCFSKVKDHKLELCDKLINNDNINCCLKC
VVFSKKNFQRGNLFLLETKQLSEFLNERHISTTHCREKYDLIDLIMEFAEMQGFKSVSDI
EHDMIHRRKVEELRRAEIDRQMEERGENSRGLENHSITSTETLSLRNNFNCSIDAAPVIV
VSYNSSTELVNNSEDNSNIENGITNILDSSSTNDQSTNESNVTLQQVCFNQSYGKWRSMD
DIKDENEINNLSVIELKQVLKANFIDYRGCCEKKELMDKVIMLYKSQKKDATSCNENDRD
LCKICMDHTIDCVLLDCGHLVSCTKCGKRLAECPICRALVVRVVHIFRV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaaatttgtaaagattgttatactaaacttggtttcttcaaaaaaaagttt
aaatgtcgtcagtgcaagggcgactattgtgaaccttgttttagcaaagtaaaagatcat
aaattagagttgtgtgacaagttaataaataatgataacattaattgttgtttaaaatgc
gtagttttttctaaaaaaaactttcagagaggaaatttgtttttgttggagacaaaacaa
ttgtcagaatttttgaatgagcgccacatatctactactcattgcagagaaaaatacgat
ttaattgatctaataatggagtttgctgaaatgcaaggttttaaaagtgtttcagatatt
gaacatgatatgatacatcgcagaaaagtggaagaattacgaagagctgagatcgatcgc
caaatggaagagaggggtgaaaacagtagaggcctggaaaatcattcaataacttcaact
gagacactatctttgagaaataactttaattgttctattgatgctgctcctgttatagtt
gtttcatataatagcagtacagaattagtaaacaattcagaagataattcaaatatagaa
aatggcataactaatattctagattcttcgtctactaatgatcagtcaacaaatgaatca
aatgttacacttcaacaagtttgttttaatcagagttatggaaaatggcgttcaatggat
gatataaaagatgagaatgaaataaataatttatctgttattgagctaaagcaagttttg
aaggcaaattttatagactacagaggttgttgtgaaaagaaggaacttatggataaagta
ataatgctgtacaaatcccaaaaaaaagacgcgacaagttgtaatgagaatgaccgtgat
ttatgtaaaatttgcatggatcatactattgactgtgtactgcttgattgtggtcacctt
gtatcatgcacgaaatgcggaaaacgactagctgaatgtccaatttgtcgtgctcttgtt
gttagagttgttcatatttttagagtttaa
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