Hydra vulgaris (swiftwater hydra): 105849831
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Entry
105849831 CDS
T01080
Name
(RefSeq) homeobox protein vab-15
KO
K09341
homeobox protein MSX
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
105849831
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
105849831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
SR-25
Motif
Other DBs
NCBI-GeneID:
105849831
NCBI-ProteinID:
XP_012565729
UniProt:
A0A8B7E5D6
LinkDB
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Position
4:complement(1184580..1187207)
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AA seq
270 aa
AA seq
DB search
MIVERFEKKHSTPFSIDYLLNYKNNKLNMDNSVSNKSLQFWNRLNDQQCHDQAFQQYNVN
KTKYNVLGGKRSNENEIKSYNHSTFNRLNLSPTSFEIEKNNQNCKIRSLLSSLPSSPSSL
SPLSSSTTSSLSSNSSNQRFEAVEFQFDLSKCILRKHKANRKPRTPFSVNQLLALEQKFK
RKQYLSISERSELSVMLRLTETQIKIWFQNRRAKQKRSKEAEIEETARNQFPHSAVNYHF
LDESSRYLPISSNLYPINKSIEYDDLYTYS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagagagatttgaaaaaaaacactcaacacctttttctattgattatttgctt
aattataaaaataataaacttaatatggataattcagtttcaaacaaatctctgcagttt
tggaatagattaaatgatcaacaatgtcatgatcaggcttttcaacaatacaatgtcaac
aagacaaaatataatgttttaggcggcaaacgatctaacgaaaatgaaattaagtcttac
aatcattcaaccttcaatcgtctcaatctatctcctactagctttgaaatagaaaaaaac
aatcaaaactgcaaaatacgttctcttttgtcctcattaccttcatcgccatcatcttta
tctccgttatcctcctcgacgacatcttcgttatcatcaaatagttctaatcaacgattt
gaagcagttgaatttcaatttgatttgagtaaatgcattcttcgcaaacacaaagcaaat
cgaaagccgaggacgccattttctgtgaatcagcttcttgctctcgaacagaaatttaaa
cgtaagcaatatttatctatatctgaaagatcagagttaagtgtcatgctacggctcaca
gaaactcaaataaaaatctggtttcaaaatcgaagagcaaaacaaaaaagaagcaaagaa
gcggaaatcgaagagacagctcgaaaccaatttcctcattcagcagtaaattatcatttt
ttggatgaatcttcgcgctatttaccaatttcgtcaaatttataccctattaataaatca
atagaatacgacgacctttacacatactcttaa
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