KEGG   Hydra vulgaris (swiftwater hydra): 124806465
Entry
124806465         CDS       T01080                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124806465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmg03019]
    124806465
Messenger RNA biogenesis [BR:hmg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     124806465
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR19_1st eIF2A WDR90_beta-prop_4th Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_Vps41 WD40_RFWD3 Tricorn_2nd Beta-prop_VPS8 RMC1_N Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_SCAP Beta-prop_WDR75_2nd PROPPIN WDR54 PD40 KNTC1_N WD40_like Beta-prop_RIG_1st Vgb_lyase Nucleoporin_N
Other DBs
NCBI-GeneID: 124806465
NCBI-ProteinID: XP_047123385
LinkDB
Position
14:complement(1739887..1770275)
AA seq 302 aa
MYSVLQKIENAHEDSIWSISWHTNETDKCENIITGGIDDLIKCWKWSENSLTSKWNFEGH
QLGIVSTDINNTGKLGASSSLDSHIRIWDLDKGKQIKSIDLGPVDSWTVTFSPDSRYIAT
GSHTGKVNLIGVESGIKEETLDTRSKFTMSIAYSPDGKYLACGAIDGIINIFDMTSKKLL
HTLEGHAMPIRSLTFSPDSQILLTASDDGHLKMYDVQHANLAGTLSGHGSWVVSVDYSPD
NKHFVSASSDKSVKIWDASTRQCIHTFYEHKDQVWGVCYNSTGSKIASVGDDKSIVIYDV
PI
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtattccgttttgcagaaaatagagaatgctcatgaagatagtatttggtcaatatct
tggcataccaatgaaacagacaaatgtgaaaatattatcacaggtggcattgatgactta
ataaaatgttggaaatggtctgaaaacagtttaacatcaaaatggaattttgaaggacat
cagcttggaattgtttctactgatataaacaatactggaaaattaggtgcatccagctct
ttagatagtcacataagaatatgggatttagataaaggtaaacaaatcaagagcattgat
cttggcccagttgattcttggacagtcactttttcacctgattcacggtatattgctaca
ggcagtcatacaggcaaagtaaacttgattggagttgaaagtggcataaaagaagaaact
cttgatacaagaagtaaatttacaatgagtattgcttatagccctgatggaaaatattta
gcgtgtggtgccattgatggtattataaacatatttgatatgacaagcaaaaagttattg
catacattggaaggccatgccatgcccattcgatctttgactttttcaccagattcacaa
atactgttaacagcatcagatgatggtcatttaaagatgtatgatgtacaacatgcaaac
ttagctggtactctatcaggacatggttcatgggttgtttctgttgactattctccagac
aacaaacattttgtttctgcatcaagcgacaaaagtgtaaaaatatgggatgcgagcaca
cgacaatgtattcatacgttttatgaacacaaagaccaggtatggggcgtttgttacaac
agtactggatccaaaattgcttcagttggtgatgataaatctatagttatttatgatgtt
cctatttga

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