Hylobates moloch (silvery gibbon): 116460292
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Entry
116460292 CDS
T08803
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2 isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116460292 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmh03019
]
116460292 (SKIC2)
Enzymes [BR:
hmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116460292 (SKIC2)
Messenger RNA biogenesis [BR:
hmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116460292 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
116460292 (SKIC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
116460292
NCBI-ProteinID:
XP_031997221
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGHWELLNLPGAPESSLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPAGMDEPTITDLNTREEAEEEIDFE
KDLLTIPPGFKKGMDFAPKDRPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGD
AVSASPCSAALARASSLEDLVLKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKKLGALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLS
AGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATPEVPYPDD
LVGFKLFLPEGPCDHTVVKLHPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVERGLRARKLEELIQGAQCVHSPRF
PAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagagcgactcgtactacctcctccagatcccctggacctaccccttcgg
gccgtggagctcggatgcacggggcactgggagctgctgaacttgcctggagctccagag
agtagccttccccatggcctccctccttgtgccccagatctgcagcaagaagcagaacag
ttgtttctgtcatccccagcctggctgcctctgcatggtgtggagcactcagcccgaaaa
tggcagaggaagacggatccctggtctcttttggctgtcctgggagccccagtcccatcg
gacctacaggcccaaagacacccaaccacaggccagatactgggttacaaagaggtcttg
ctggagaacacaaatctctcggccacaacctccttgtctcttcgccggcctccagggcca
gcctcccagtccttatggggaaatccaactcagtatcccttctggccagcggggatggat
gaacccaccataacagatctgaacacacgggaggaggctgaggaggagatagactttgag
aaagatcttcttactattccacctggtttcaagaaaggcatggactttgcaccaaaagat
cgtccaactccagctcctggactgctaagccttagctgtctgttggagcctctggatttg
ggtgggggtgacgaggatgagaatgaggcagtgggacagccaggaggtcccagaggggac
gctgtttcagcctctccctgcagtgctgccctggcccgagcaagcagcttggaggaccta
gtgttgaaggaagcgtccacagctgtatccacaccagaggccccagagcctccatctcag
gagcaatgggccatccctgtggatgccacctcccctgttggtgatttctatcgcctcatt
ccccagccagccttccagtgggcatttgaaccagatgtgtttcagaaacaggccatcctg
cacttggagcggcatgactctgtctttgtcgcagctcacacatctgcaggaaaaacagtt
gtggctgaatatgccattgccctggcccagaaacacatgacacgcaccatctacacttcg
cccatcaaggccctgagcaaccagaagttccgggacttccgaaacacgttcggggatgtg
gggctgctcaccggggatgtgcagctgcacccggaggcctcctgcctcatcatgaccaca
gagatccttcgctccatgctgtacagtggctcagatgttattcgggacctggagtgggtc
atctttgatgaggttcactatatcaacgatgccgagcgtggggtcgtgtgggaggaggtg
cttatcatgctccctgaccacgtttctatcatccttctgagtgccaccgtccccaacgcc
cttgagtttgctgactggattgggcgactgaagcgtcgtcagatctatgtgattagcact
gtaacccgccccgtgcccctggagcactatcttttcacagggaatagctccaagacccag
ggggagctctttttgttgctggactcccgaggagccttccatacaaaagggtactatgca
gctgtggaggccaagaaggagagaatgagcaaacacgcccagacctttggggccaagcag
cccacacatcaggggggccctgcacaggaccgcggagtatacctgtccctcctggcctcc
ctccgcacacgtgcccagttgcccgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcctcaggcctcacctcccttgacctcaccaccagttcagagaagagcgagatc
cacctcttcctgcagcgctgccttgctcgcctccgtggctccgaccgccagctgccccag
gtcctgcacatgtcagagctcctgaatcgcggcctgggtgtgcaccatagcggcatcctg
cctatcctcaaggagatcgtggagatgctcttcagccgcggcctggtcaaggtcttgttt
gccacagagacctttgccatgggagtaaacatgcctgctcgtacagtagtgtttgactcc
atgcgcaaacacgacggctccaccttccgggacctgcttcctggggagtatgtgcagatg
gcaggccgggcagggcggaggggcctggaccccacaggcaccgttatcctgctctgcaag
ggccgagtgcccgagatggcggacctgcaccgcatgatgatggggaagccgtctcagctg
cagtcccagttccgcctcacgtacactatgatcctcaacttgctgcgagtggatgccctc
agggtggaggacatgatgaagaggagcttctccgagtttccctcccgcaaggacagcaag
gcccatgaacaagccctggctgaactgaccaagaagctgggagctttggaggagcctgac
atgactggccaactggtcgacctgcctgaatattacagctggggggaggagctgacagag
acccagcacatgatccagcgacgcatcatggagtctgtgaacgggttgaagtctctctca
gcaggaagggtggtggttgtgaagaatcaggagcatcacaatgcattgggagtgatccta
caggtctcctcgaactccaccagcagagtattcacaaccctggtcttgtgtgataagccc
ttgtcccaggacccacaggacagggggccagccactccagaggtgccctatccagatgac
ctcgtgggattcaagctgttcctgcctgaagggccttgtgaccacaccgtggtcaagctc
cacccaggagatatggctgccatcaccaccaaggtgctccgggtgaatggggagaagatc
ctggaggacttcagcaagaggcagcagccaaaattcaagaaggatcctccccttgcagcc
gtgaccactgctgtccaggaactgctgcgtctggctcaggcccacccagccggacccccg
acccttgaccctgtcaatgacctgcagctcaaagatatgtcagttgtagagcgtgggctc
cgggctcggaagctggaggagctgatccagggggctcagtgtgtacacagcccccgtttt
cctgcccagtacctgaagctgcgggagcgaatgcagatacagaaggagatggagcggctg
cgcttcctactgtcggatcagtcactgctgctgcttcccgagtaccatcagcgagtagag
gtgctccgaaccctgggttatgtggacgaggcgggcaccgtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagttgctcctcactgagctcatgtttgacaatgcacta
agcaccctgcggcctgaggagattgctgccttgctctctggcctggtgtgccagagccct
ggggacgctggggatcagctcccaaacaccctcaagcagggaatagaacgtgtccgggct
gtggccaagaggattggtgaggtccaggtggcttgtggtctgaaccagacagtggaggaa
tttgtgggggagctgaattttgggctggtcgaggttgtgtatgagtgggcccggggcatg
cccttctccgagttggcagggctctcagggacccctgagggcctggtggtccgttgcatt
cagcgcctggctgagatgtgtcgctcactgcggggggcagcccgcctggtaggagagcct
gtgctgggtgccaagatggagacagcggctaccttgctaaggcgggacatcgtatttgcg
gccagcctctacacccagtga
DBGET
integrated database retrieval system
