Hylobates moloch (silvery gibbon): 116460811
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Entry
116460811 CDS
T08803
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
116460811 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
DUF4959
Motif
Other DBs
NCBI-GeneID:
116460811
NCBI-ProteinID:
XP_031997898
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All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MSSGAPAHLGLCLWLWLGATLGREQGQASGLLRLSVLPEDRLQMKWRESEGSGLGYLVQV
KPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRLLLARREFVIEDLKSSS
LDRSSQRPLGSGAPEPTPSHVGSPDPEQASEPRVASAPSQDPPTPGGSEWRQTGPHFRCL
PPVPADMVFLVDGSWSIGHSHFQQVKEFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWDL
NSLGTKEQVLAAVRRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVILVTDGKSQ
DDVHTAARVLKDLGVNVFAVGVKNADEAELRLLASPPRDITVHNVLDFLQLGALAGLLSR
LICQMLQGGSPRQGPAVAPALDTLPAPTSLVLSQVTSSSIRLSWTPAPRLPLKYLIVWRA
SRGGTPREVVVEGPAASMELHNLASRTEYLVSVFPIYEGGVGEGLRGLVTTAPLPPPRAL
TLAAVTPRTVHLTWQPSAGATRYLVRCSPASPKGEEEEREVQVGRPEVLLDGLEPGRDYE
VSVQSLRGPEGSEARGIRARTPALAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYAS
SEGGHSGQTEAPGNATSATLGPLSSSTTYTVRVTCLYPGGGSSALTGRVTTKKAPSPSQL
SVTELPGDAVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAILPGLGRHTEY
DVTILAYYRDGARSDPVSLRYTPSTVSGSPPSNLALASETPDSLQVSWTPPLGRVLHYWL
TYAPASGLGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSATGQTACPA
LRPNGSLPGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRRVSDVHPA
PLPPEHTIVFLVRLLPETPREVFALWQMTAEDFQPLLGVLLDAGRKSLTYFHRDPRAALQ
EATFDPQEVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSPPAAGFITLGRL
AKARGPRSSSAAFQLQTLQIVCSDTWADEDRCCELPASRDGETCPAFVSACSCSSETPGP
PGPQGPPGLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQGIPGRVGLQGP
KGMRGLEGTAGLPGPPGPRGFQGMAGARGTSGERGPPGAVGPTGLPGPKGERGEKGEPQS
LATLYQLVSQASHVSKFDSFYENTRPPVPILEQKLEPGTEPLGSPGTRSEALLPGEWGRG
GRHLESRGEPGAVGQTASPGQQGG
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgagctctggagcccctgcacacctcggcctctgcctctggctgtggctgggcgccacc
ctgggaagagagcaaggacaagcaagtggcctcctgaggctgtctgtgctgcctgaggac
cggctgcagatgaagtggagagagtcggaggggagcggcctcggctacctggtgcaggtg
aagcccatggcaggggactcggaacaggaggtgatactgaccaccaagacccctaaggcc
acagtggggggcctgagcccctccaagggctacaccttgcagatcttcgagctcactggc
tctgggcgcctcctgctggctcggagggagtttgtgattgaggatctgaagagtagctcc
ctggacagaagcagccagaggcccctcggctctggagccccggagcccaccccctcccac
gtggggagcccagaccctgagcaggcttctgagccccgagttgcctccgcgccaagccag
gatccgcccactcctggtgggtcggagtggagacagaccggcccccacttccgctgcctg
ccccccgtgcctgctgacatggtcttcctggtggacgggtcctggagcattggccacagt
cacttccagcaggtcaaggagttcctggccagcgtcatcgcaccctttgaaatcgggcca
gataaagtccaagtaggcctgactcagtacagcggggatgcccagactgagtgggacctg
aactccctcggcaccaaggagcaggtgctggcagctgtgcgccgcctccgatacaagggg
ggaaacacgttcacaggccttgccctgacccacgtgctggggcagaacctgcagcccgcg
gctggcctccgtccagaggcggccaaggtggtgattctggtgacagacggcaagtcccag
gacgatgtgcacactgctgcccgtgtcctcaaggacctgggcgtgaacgtcttcgctgtg
ggtgtgaagaatgccgatgaggctgagctgaggctcctggcatccccaccgcgggacatc
actgtccacaatgtgctggacttcctgcagcttggcgcgctggctgggctgctcagccgc
ctcatctgccagatgctccagggtgggagcccgcggcagggcccagcagtggctccagcc
ctggacaccctccccgcccccaccagcctggtcctgagccaggtgacctcctccagcatc
cgcctgtcgtggactccagccccccggctccccctcaagtatctgatcgtttggcgcgcc
tccagaggtggcacccccagggaggtggtggtggaggggcccgccgcctccatggagctg
cacaacctcgcctcccgcacagagtacttggtctccgtgttccccatctatgagggcggt
gttggcgaaggccttcggggcctggtgaccacagcacctctgcccccgccccgggcgctg
accctggccgcagtgacgcccagaaccgtccacctcacctggcagccctcggccggggcc
acccgctacctggtgcgatgttctcctgcttcccccaagggtgaggaggaggagcgagag
gtgcaggtcgggcggcccgaggtgctgctggatggcctggaaccgggcagggactatgag
gtctccgtgcagagcctgcgaggccctgagggcagcgaggcccggggcatccgtgccagg
acccccgccctggcccccccgagacacctgggcttctcagacgtgagccacgacgcggca
cgagtgttctgggagggcgctccgaggcctgtgcgcctggtcagggtcacctatgcctcc
agcgagggcggacactcagggcagacagaggctcctgggaacgccacctcggccacgctg
gggcctctctcttcctccaccacctacactgtccgcgtcacctgcctctaccctggggga
ggttcctctgcgctgactggccgggtgaccaccaagaaagctcccagcccaagccagctg
tctgtgacggagctgccaggggacgcggtccagctggcgtgggtggccgcagccccgtct
ggcgtgcttgtctaccagatcaagtggacgcccctgggagaggggaaggctcatgagatc
tctgtcccagggaacctcggcacagccatcctgcctggcctagggaggcacacggagtac
gacgtcaccatcctggcctactacagggatggggcccgcagtgaccctgtgtccctccgc
tataccccctccacagtgagcgggagccccccctccaacctggccctggcctcggagacc
cccgacagcctgcaggtcagctggacacccccgcttggccgcgtgctccattactggctc
acctacgcgcccgcctctggcttgggacccgagaaatccgtctctgtgccaggacccagg
agccacgtgacactccccgacctgcaggcagccaccaagtacagggtcctggtctcagct
gtctatgcagcaggcaggagtgaggctgtgtctgccacgggccagacagcctgcccagcc
ctccgccccaacggctccctcccagggtttgacctgatggtggcctttggcctggtggaa
aaggcttatgcttccatccggggcgtggccatggagccgtctgccttcggtgggaccccg
acctttacgctcttcaaggacgcgcagctgacaagacgggtcagtgacgtccacccagcc
cccctccctccagagcacaccatcgtcttccttgtgcgcctgcttcccgagacaccccgt
gaggtcttcgcgctgtggcagatgacggccgaggacttccagcccctcctcggggttctg
ctggatgccgggaggaagtccctgacctacttccaccgcgaccccagggctgccttgcag
gaggccaccttcgacccgcaggaagtgaggaagattttcttcgggagcttccacaaggtg
cacgtggctgtgggccgctccaaggtcaggctctatgtggactgccggaaggtggctgag
cggcccctcggggaggtgggcagcccacccgctgccggcttcatcacactggggaggctg
gccaaagccaggggcccccggagcagctcggccgcgtttcagctccagacgctgcagatc
gtgtgcagtgacacctgggccgatgaggaccggtgctgtgagctccctgcctcgagggat
ggagagacctgcccggccttcgtgtctgcctgttcctgttcctcagaaacccctgggccc
ccagggccccaaggacccccaggcctccctgggaggaatggcaccccaggagagcagggc
ttcccagggcccaggggtccaccaggggtcaaaggagagaaaggagaccatgggctccca
ggcttgcagggtcaccccggccaccagggcatccctgggagagttggcctccagggacca
aagggaatgagaggcctggagggaactgctggcctgcccggaccccctggccccaggggg
ttccagggcatggcaggggccaggggcactagtggagagcgaggacctccaggggccgtg
gggcccacagggctgccggggcccaaaggggaacgaggagagaagggcgagccgcagtcc
cttgccaccctctaccagctcgtgagccaggcctcacacgtgtcaaagttcgactccttc
tacgagaacaccaggccccccgtgcccatcttggagcagaagctggagccaggcactgag
cccctggggtcccctggcacccgcagcgaggccctgcttcccggagaatgggggcgtggt
ggccgccaccttgagagcagaggggagcctggagctgttggtcagacggccagccctggg
cagcaggggggctag
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