Hylobates moloch (silvery gibbon): 116461911
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Entry
116461911 CDS
T08803
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X5
KO
K12821
pre-mRNA-processing factor 40
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116461911 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmh03041
]
116461911 (PRPF40B)
Spliceosome [BR:
hmh03041
]
Complex A
U1 snRNP components
U1 related factors
116461911 (PRPF40B)
Complex B
116461911 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
DUF4936
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
116461911
NCBI-ProteinID:
XP_031999806
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
LPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEAVLVKQEAAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTPVPTGLLE
PEPGGSEDCDVSEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNRE
KAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKE
EARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFF
LAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDK
EDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWM
ELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNT
AFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSML
RQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLEQTECQHLHTKGRK
HSRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGA
ALGGRGSPSSHLLGADHGFRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQ
DKDRELQQAEHPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccagggatccccccaccctttcctccg
atggggcttccccccatgagtcagagaccaccagctatcccccccatgccacctggcatc
ctgcccccaatgcttccaccaatgggggcgccaccaccactcacacagataccaggaatg
gtacctccgatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccaggtgcggacaccgccagctctgctgtagctgggacaggccctccgagggccctatgg
agtgagcatgtggccccagatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggccgagctgctcctgtcccaatgtccc
tggaaagagtacaagtcggacacaggcaaaccttattactataacaaccagagtaaagag
tctcgctggacccggcccaaggatctggatgacctagaggcagttctagtcaaacaagag
gctgcagggaaacagcagcagcagctgccacagacacttcagccacagccacctcagcca
cagcctgaccccccacctgcacctcctggccccaccccagtgcccacaggcctcctggaa
cctgagccaggtgggagtgaagattgtgatgtgtcggaggccacccagcccctggaacag
gggttcctgcagcagctggaggagggccccagcagttctggacagcatcagccacagcag
gaggaggaggaatcaaagccagaaccagagaggtctggcctcagttggagcaaccgggag
aaggcaaagcaggcattcaaggaactgctgagggacaaggctgtcccctccaatgcctca
tgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgcctaaactg
agtgaaaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggag
gaagcccggctaagggccaaagaggccaagcagaccctgcagcatttcctggagcagcat
gaacgcatgacctccaccacccgctaccggcgggcagaacagacctttggggagctggag
gtctgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttc
ctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaatatccaggcccta
aagagcatcctggatgggatgagtagtgtcaacttccaaaccacgtggtcccaggcccag
cagtacctcatggataaccccagctttgctcaggaccatcagctgcagaacatggacaag
gaagacgcactgatctgtttcgaggagcacatccgagctttggagagggaagaggaggag
gaacgggagcgggcccggcttcgggagcgacgccaacaacgcaagaatcgggaggccttc
cagaccttcctggacgagctgcatgagacagggcagctgcactctatgtccacctggatg
gagctatatccagcagtcagcaccgatgtccgctttgccaacatgctgggccagccgggc
tccacccctctggacttgttcaagttctatgtggaggagttgaaggcacgattccatgat
gaaaagaagatcattaaggatatccttaaggaccggggcttctgcgtggaggtgaacaca
gcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcactggacgca
ggcaacatcaagctgaccttcaatagtctgctggagaaagcagaggcacgggagagggaa
cgggaaaaggaggaggcacgcaggatgcggcgcagggaagctgcctttcgaagcatgctg
aggcaggctgtgcctgctctggagctaggcactgcctgggaagaggtccgtgagcgtttt
gtgtgtgactcagcctttgagcagatcaccctggagtcggagcggatccggctcttccgg
gagttcctacaggtgctggagcagactgaatgccagcacctccacaccaaaggccgaaag
catagcaggaaaggcaagaagcaccatcgcaagcgttcccactcaccctcaggctctgag
tcagaagaagaggagctgcccccaccatctctccggccccccaagcggaggaggcggaac
ccctcagagtcaggctctgagccctcttcctcacttgattcagttgaaagtgggggtgct
gcccttggaggacggggctccccttcctcccatcttcttggagcagatcatggctttcgg
aaagccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaacagtcctgag
agtgagacagaccctgaggagaaagctggcaaggagagcgatgagaaagaacaagaacag
gacaaggacagggagctgcagcaggcagagcatcctaaccgttccccaggctttggaatc
aagaaggagaagacaggctgggacacgtcagaaagtgagctgagtgagggtgagctggag
aggcggcggcggacactcctacagcagctggacgatcaccagtga
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