Hylobates moloch (silvery gibbon): 116467560
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Entry
116467560 CDS
T08803
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X5
KO
K06237
collagen type IV alpha
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh04151
PI3K-Akt signaling pathway
hmh04510
Focal adhesion
hmh04512
ECM-receptor interaction
hmh04820
Cytoskeleton in muscle cells
hmh04926
Relaxin signaling pathway
hmh04933
AGE-RAGE signaling pathway in diabetic complications
hmh04974
Protein digestion and absorption
hmh05146
Amoebiasis
hmh05165
Human papillomavirus infection
hmh05200
Pathways in cancer
hmh05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116467560 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116467560 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116467560 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116467560 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
116467560 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
116467560 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116467560 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
116467560 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116467560 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
116467560 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
116467560 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmh04147
]
116467560 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
hmh00536
]
116467560 (COL4A1)
Exosome [BR:
hmh04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116467560 (COL4A1)
Glycosaminoglycan binding proteins [BR:
hmh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116467560 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116467560
NCBI-ProteinID:
XP_032007204
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGI
PGNPGPPGLPGLQGPIGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKLGPRGKPGKDGDKGEKGS
PGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGLPGQPGAPGLPVPGLAGAPGFPGERGEKGDRGFPGVPLPGPSGRDGLPGPPGSPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLLCDIDGYRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGPPGAEGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNG
LPGNPGVQGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGVIGPPGLQGI
RGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPG
PKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPAGAPG
LPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGE
KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKG
LPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPK
GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFRKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcagcgtctggctgctgctgctgcccgccgcccttctgctccacgag
gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac
tgccatggagtgaagggacaaaagggtgaaaggggcctcccggggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat
actggagaaccaggactacctggaacaaaagggacaagaggacctccgggagcatctggc
taccctggaaacccaggacttcccggcattcctggccaagacggcccaccaggcccccca
ggtattcctggatgcaatggcacaaagggagagagagggccgctcgggcctcctggcttg
cctggtttcgctggaaatcccgggccaccagggttaccaggaatgaagggtgatccaggt
gagatacttggccatgtgcccgggatgctgttgaaaggcgaaagaggatttcccggaatc
ccagggaatccaggcccaccaggactgccagggcttcaaggtcctattgggcctccagga
tttaccggaccaccaggtcccccaggccctcccggccctccaggtgaaaagggacaaatg
ggcttaagttttcaaggaccgaaaggtgacaagggtgaccaaggggtcagtgggcctccg
ggagtaccaggacaagctcaagttcaagaaaaaggagactttgccaccaagggagaaaag
ggccaaaaaggtgaacctggatttcaggggatgccaggggtcggagagaaaggtgaaccc
ggaaaactaggacccagaggaaaacccggaaaagatggtgacaaaggggaaaaagggagt
cccggttttcctggtgaacccgggtacccaggactcgtaggccgccagggcccacaggga
gaaaagggtgaagcaggtcctcccggcccacctggaattgttataggcacaggacctttg
ggagaaaaaggagagaggggctaccctggaactccggggccaagaggagagccaggccca
aaaggtttcccaggactaccaggccaacccggagctccaggcctccctgtacctgggctg
gctggtgcccctggcttccctggtgaaagaggagaaaaaggtgaccgaggatttcctggt
gtacctctgccaggaccaagtggaagagacgggctcccgggtcctcctggttcccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccagggtcctcctggaattccagggcagccaggatttataggcgaaattggagagaaa
ggtcaaaaaggagagagttgcctcctctgtgatatagatggatatcgggggcctcccggg
ccacaaggacccccaggagaaataggtttcccaggacagccgggggccaagggcgacaga
ggtttgcctggcagagatggtgtcgcgggagtgccagggcctcaaggtacaccagggctg
ataggccagccgggagccaagggggagcctggtgagatttatttcgacttgcggctcaaa
ggtgacaaaggagacccaggctttccaggacagcccggcatgccagggagagcgggttct
cctggaagagatggccatccgggtcttcctggccccaagggctcaccgggttctgtagga
ttgaaaggagagcgtggcccccctggaggagttggatttccaggcagtcgtggtgacacc
ggcccccctgggcctccaggatatggtcctactggtcccattggtgacaaaggacaagca
ggctttcctggaggccctggatccccaggcctgccaggtccaaagggtgaaccaggaaaa
gttgttcctttaccaggcccccctggagcagaaggactgccagggtccccaggcttccca
ggtccccaaggagaccgaggctttcccggaaccccaggaaggccaggcctgccaggagag
aagggtgctgtgggccagccgggaattggatttccagggccccccggccccaaaggtgtt
gacggcttacctggagacatggggcctccggggactccaggtcgcccgggatttaatggc
ttacctggaaacccaggtgtgcagggccagaagggagagcctggaattggtctgccggga
ctcaaaggtttgccaggtcttccaggcattcctggcacacctggggagaaggggagcatt
ggggtaccaggcgttcctggagaacacggagtgatcggaccccctgggcttcaggggatc
agaggtgaaccgggacctcctggattgccaggctccgtggggtctccaggagttccagga
ataggcccccctggagctaggggtccccccggaggacaaggaccaccggggttgtcaggc
cctcctggaataaaaggagagaagggtttccccggattccctggactggacatgccgggc
cctaaaggagataaaggggctcaaggacttcctggcataacgggacagtcagggctccct
ggccttcctggacagcagggggctcctgggattcctgggtttccaggttccaagggagaa
atgggcgtcatggggacccccgggcagccaggctcaccaggaccagcgggtgctccggga
ttaccgggtgaaaaaggggaccatggctttccgggctcctcaggacccaggggagaccct
ggcttgaaaggtgataagggggatgtcggtctccctggcaagcctggctccatggataag
gtggacatgggcagcatgaagggccagaagggagaccaaggagagaaaggacaaattgga
ccaattggtgagaagggatcccgaggagaccctgggaccccaggagtgcctggaaaggac
gggcaggcaggacagcctgggcagccaggacctaaaggtgatccaggtataagtggaacc
ccaggtgctccaggacttccgggaccaaaagggtctgttggtggaatgggcttgccagga
acacctggagagaaaggcgtgcctggcatccctggcccacaaggttcacctggcttacct
ggagacaaaggtgcaaaaggagagaaagggcaggcaggcccacctggcataggcatccca
gggctgcctggtgaaaagggagatcaagggatagcgggtttcccaggaagccctggagag
aagggagaaaaaggaagcattgggatcccaggaatgccagggtctccaggccttaaaggg
tctcccgggagtgttggttatccaggaagccctgggctgcctggagaaaaaggtgacaaa
ggcctcccaggattggatggcatccctggtgtcaaaggagaagcaggtcttcctgggacg
cctggccccacaggcccagctggccagaaaggggagccaggcagtgacggaatcccgggg
tcagcaggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg
gccaaaggagacaaaggttcaaagggtgaggtgggtttcccaggattagccgggagccca
ggaattcctggatccaaaggagagcaaggattcatgggtcccccggggccccagggtcag
ccagggttaccgggatccccaggccatgccacggaggggcccaaaggagaccgcggacct
cagggccagcctggcctgccaggacttccgggacccatggggcctccagggcttcctggg
attgatggagttaaaggtgacaaaggaaatccaggctggccaggagcacccggtgtccca
gggcccaagggagaccctggattccagggcatgcctggtatcggtggctctccaggaatc
acaggctctaagggtgatatggggcctccaggagttccaggatttcaaggtccaaaaggt
cttcctggcctccagggaattaaaggtgatcaaggcgatcaaggtgtcccgggagctaaa
ggtctcccgggtcctcctggccccccaggtccttacgacatcatcaaaggggagcccggg
ctccctggtcctgagggccccccagggctgaaagggcttcagggactgccaggcccgaaa
ggccagcaaggtgttacgggattggtgggcatacctggacctccaggtattcctgggttt
gacggtgcccctggccagaaaggagagatgggacctgccgggcctactggtccaagagga
tttccaggtccaccaggccccgatgggttgccaggatccatggggcccccaggcacccca
tctgttgatcacggcttccttgtgaccaggcacagtcaaacaatagatgacccacagtgt
ccttctgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaatgaa
cgggcccatggccaggacttgggcacggccggcagctgcctgcgcaagttcagcacaatg
cccttcctgttctgcaatattaacaacgtgtgcaactttgcatcacgcaatgactactcg
tactggctgtctacccctgagcccatgcccatgtcaatggcacccatcacgggggacaat
ataagaccatttattagtaggtgtgctgtgtgtgaggcgcctgccatggtaatggccgtg
cacagtcagaccattcagatcccaccgtgccccagcgggtggtcctcgctgtggattggc
tactcttttgtgatgcacaccagcgctggtgcagaaggctctggccaagccctggcgtcc
cccggctcctgtctggaggagtttagaagtgcgccattcatcgagtgtcatggccgtggg
acctgtaattactacgcaaacgcttacagcttttggctcgccaccatagagaggagcgag
atgttcaggaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc
cgctgccaagtctgtatgagaagaacataa
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integrated database retrieval system
