Hylobates moloch (silvery gibbon): 116471032
Help
Entry
116471032 CDS
T08803
Symbol
VCAN
Name
(RefSeq) versican core protein isoform X2
KO
K06793
versican core protein
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh04514
Cell adhesion molecule (CAM) interaction
hmh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116471032 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116471032 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hmh00535
]
116471032 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
hmh00536
]
116471032 (VCAN)
04091 Lectins [BR:
hmh04091
]
116471032 (VCAN)
Proteoglycans [BR:
hmh00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
116471032 (VCAN)
Glycosaminoglycan binding proteins [BR:
hmh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
116471032 (VCAN)
Lectins [BR:
hmh04091
]
C-Type lectins
Lecticans
116471032 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
hEGF
EGF_TEN
Sushi
EGF_3
EGF_2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
116471032
NCBI-ProteinID:
XP_032012800
LinkDB
All DBs
Position
Unknown
AA seq
2408 aa
AA seq
DB search
MFINIKSILWMCSTFIVTQALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLAVVKL
LASDAGLYRCDVMYGIEDTQDTVSLAVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
TPEQLFAAYEDGFEQCDAGWLSDQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRRMSDLSVIGHPI
DSESKEDEPCSEETDPVHDLMAEILPDFPDIIEIDLYHSEENEEEEECANATDVTTTPSV
QYINGKHLVTTVPKDPEAAEARRGQFESVAPSQNFSDSSESDTHPFVVGKMELSTAVQPN
ESTETTESLEITWKPEIYPEAPEHFSGGEPDVFPTVPFHEEFEHGTAKKGAESVTERDTE
VGRQAHEYTEPVSLFPEESSGEIAIDQESQKIAFARATEVTFGEEVEKSTSVTYTPTIVP
SSASAYVSEEEAVTLIGNPWPDDLLSTKESWVEATPRQVVELSGSSSIPITEGSGEAEED
EDTMFTMVTDLSQRNTTDTLITLDTSRIITESFFEVPATTIYSVSEQPSAKVMPTKFVSE
TDTSEWISSTSVEEKKRKAEEGTTGTASTVEVYSPTQRLDQLILPSELESPNVATSSDSG
TRKSFMSLTTPTQSEREMTDSTPVFTETNTLENFWSQTTEHSSIHQPGAQEGLTTLPGSP
ASVFMEQGSGEAAADPETTTVSSFSLNLEHEIQAKKEAAGSLSPHVETTFSTEPTGLVLS
TVMNREVAENISQTSRDVLISERLGEPNYGAEIRGFSTGFPLEEDFSGDFREYSTVSHPI
AKEETVMMEGSGDAAFRDTQISPSTVPTSVHISLISDSEGPSSTMVSTSAFPWEEFTSSA
EGSGEQLVTVSSSVVPVLPSAVGKFSGTASYIIDEGLGEVGTVNEIDRRSTILPTAEVEG
TKAPVEKDEVKVSGTISTNFPQTMEPAKLWSRQEVNPVRQEIESETTSEEQIQEEKSFES
PQNSPATEQTIFDSHTFTETELKTTDYSVLTTKKTYSDDKEMKEEGTSLVNMSTPDPDAN
GLESYTTLPEATEKSHFFLATALVTESIPAEHVVTDSPIKEEESTKHFPKGMRPTIQESG
TEPLFSGLGSGEEVLPTLPTESVNFTEVEQINNTLYPHTSQVESTSNDKTEDSNRMENVA
KEVGPLVSQTDIFEGSGSVTSTTLIEILSDTGAEGPTVAPLPFSTDIGHPQNQTLRWAEE
IQTSRPQTITEQDSNKNSSTAEITETTTSSTDFLARAYGFEMAKEFVTSAPKPSDLYYEP
SGEGSGEVDIVGSFHTSATTQATRQESSTTFVSDGSLEKHPEVPSAKAVTADGFPTVSVL
LPLHSEQNKSSPDPTSTLSNTVSYERSTDGSFQDHFREFEDSTLKPNRKKPTENIIIDLD
KEDKDLILTITQSTILEILPELTSDKNTIIDIDHTKPVYEDILGMQTDIDPEVPSEPHDS
NDENNDDSTQVQETYEASVNLSLTEETFEGSGDVLASYTQATHDESMTYEDRSQLGHMGF
NFTTGIPAPSMETELDILLPMATSLPIPRKSATVIPEIEGIKAEAKALDDMFESSTLSDG
QAIADQSEIIPTLGQFERTQEEYEDKKHAGPSFQPEFFSGAEEALVDHPPYLSIATTHLM
DRSLTEVPKVMEGSSPPYYTDTTLAVSTLAKLSSQTPSSPLTIYSGSEASGHTEIPQPSA
LPEIDVGSSVMSPQDSFKEIHVNIEATFKPSSEEYLHITEPTSLSPDTKLEPSEDDGKPE
LLEEMESSPTELIAVEGTEILQDFQNKTDGQVSGEAIKMFPTIKTPEAGTVITTADEIKL
EGATQWPHSTSASATYGVEAGVVPWLSPQTSERPTLSSSPEINPETQAALIRGQDSTIAA
SEQQVAARILDSNNQATVSPVEFNTEVATPPFSLLETSNETDFLIGINEESVEGTAIYLP
GPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFNT
FRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSIL
SHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTDGSTLQYENWRPNQPDSFFSAGEDCVVI
IWHENGQWNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYEINSLIRYHCKDG
FIQRHLPTIRCLGNGRWAIPKITCMNPSAYQRTYSMKYFKNSSSAKDNSINTSKHDHRWS
RRWQESRR
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgttcataaatataaagagcatcttatggatgtgttcaacctttatagtaacccaggcg
ctacataaagtcaaagtgggaaaaagcccaccggtgaggggctccctctctggaaaagtc
agcctaccttgtcatttttcaacgatgcctactttgccacccagttacaacaccagtgaa
tttctccgcatcaaatggtctaagattgaagtggacaaaaatggaaaagatttgaaagag
actactgtccttgtggcccaaaatggaaatatcaagatcggtcaggactacaaagggaga
gtgtctgtgcccacacatcccgaggccgtgggcgatgcctccctcgccgtggtcaagctg
ctggcaagtgatgcgggtctctaccgctgtgatgtcatgtacgggattgaagacacacaa
gacacggtgtcactggctgtggatggggttgtgtttcactatagggcggcaaccagcagg
tacacactgaattttgaggctgctcagaaggcttgtttggacgttggggcagtcatagca
actccagagcagctctttgccgcctatgaagatggatttgagcagtgtgacgcaggctgg
ttgtctgatcagactgtcagatatcccatccgggctccccgagtaggctgttatggagat
aagatgggaaaggcgggagtcaggacctatggattccgttctccccaggaaacttacgat
gtgtattgttatgtggatcatctggatggtgatgtgttccacctcactgtccccagtaaa
ttcaccttcgaggaggctgcaaaagagtgtgaaaaccaggacgccaggctggcaacagtg
ggggaactccaggcggcgtggaggaacggctttgaccagtgcgattacgggtggctgtcg
gatgccagcgtgcgccaccctgtgactgtggccagggcccagtgtggaggtggtctactt
ggggtgagaaccctgtatcgttttgagaaccagacaggcttccctccccctgatagcaga
tttgatgcctactgctttaaacgtcgaatgagtgatttgagtgtaattggtcatccaata
gattcagaatctaaagaagatgaaccttgtagtgaagaaacagatccagtgcatgatcta
atggctgaaattttacctgacttccctgacataattgaaatagacctataccacagtgaa
gaaaatgaagaagaagaagagtgtgcaaatgctactgatgtgacaaccaccccatctgtg
cagtacataaatgggaagcatcttgttaccactgtgcccaaggacccagaagctgcagaa
gctaggcgtggccagtttgaaagtgttgcaccttctcaaaatttttcggacagctctgaa
agtgatactcatccatttgtagtaggcaaaatggaattgtctactgctgtgcaacctaat
gaatctacagaaacaactgaatctcttgaaattacatggaagcctgagatttaccctgaa
gcaccggaacatttttcaggtggtgagcctgatgttttccccacagtcccattccatgag
gaatttgaacatggaacagccaaaaagggggcagaatcagtcacagagagagatactgaa
gttggtcgtcaggcacatgaatatactgaacctgtatctctatttcctgaagagtcttca
ggagagattgccattgaccaagaatctcagaaaatagcctttgcaagggctacagaagta
acatttggtgaagaggtagaaaaaagtacttctgtcacatacactcccactatagttcca
agttctgcatcagcatatgtttcagaggaagaagcagttaccctaataggaaatccttgg
ccagatgacctgttgtctaccaaagaaagctgggtagaagcaactcctagacaagttgta
gagctctcagggagttcttcaattccaattacagaaggctctggagaagcagaagaagat
gaagatacaatgttcaccatggtaactgatttatcacagagaaatactactgatacactc
attactttagacactagcaggataatcacagaaagcttttttgaggttcctgcaaccacc
atttattcagtttctgaacaaccttctgcaaaagtgatgcctaccaagtttgtaagtgaa
acagacacttctgagtggatttccagtacctctgttgaggaaaagaaaaggaaggcggag
gagggaactacaggtacggcttctacagttgaggtatattcacctactcagagattggat
caattaattttaccctctgaattagaaagtccaaatgtagctacatctagtgattcaggt
accaggaaaagttttatgtccttgacaacaccaacacagtctgaaagggaaatgacagat
tctactcctgtctttacagaaacaaatacattagaaaatttttggtcacagaccactgaa
cacagcagtatccatcaacctggggctcaggaagggctgaccactctcccaggtagtcct
gcctctgtctttatggagcagggctctggagaagctgctgctgatccagaaaccaccact
gtttcttcattttcattaaatttagagcatgaaattcaagccaaaaaggaagcagctggc
agtttgtctccacatgtggaaactacattctccactgagccaacaggactggttttgagt
acagtaatgaacagagaagttgctgaaaatataagccaaacatccagggatgtactgatt
tcagagcgattaggagaaccaaattatggggcagaaataaggggcttttccacaggtttt
cctttggaggaagatttcagtggtgactttagagaatactcaacagtgtctcatcccatt
gcaaaagaagaaacggtaatgatggaaggctccggagatgcagcatttagggatacccag
atttcaccatctacagttcctacttcagttcacatcagtctcatatctgactcagaagga
cccagtagcaccatggtcagcacttcagccttcccctgggaagagtttacatcctcagct
gagggctcaggtgagcaactggtcacagtcagcagctctgttgttccagtgcttcccagt
gctgtgggaaagttttctggtacagcttcctacattattgatgaaggattgggagaagtg
ggtactgtcaatgaaattgatagaagatccaccattttaccaacagcagaagtggaaggt
acgaaagctccagtagagaaggacgaagtaaaggtcagtggcacaatttcaacaaacttt
ccccaaactatggagccagccaaattatggtctaggcaagaagtcaaccctgtaagacaa
gaaattgaaagtgaaacaacatcagaggaacaaattcaagaagaaaagtcatttgaatcc
ccccaaaactctcctgcaacagaacaaacaatctttgattcacacacatttactgaaact
gaactcaaaaccacagattattctgtactaacaacaaagaaaacttacagtgatgataaa
gaaatgaaggaggaaggcacttctttagttaacatgtctactccagatccagatgcaaat
ggcttggaatcttacacaactctccctgaagctactgaaaagtcacattttttcttagct
actgcattagtaactgaatctataccagctgaacatgtagtcacagattcaccaatcaaa
gaggaagaaagtacaaaacattttcccaaaggcatgagaccgacaattcaagagtcaggt
actgagcccttattctctggactgggatcaggagaagaagttttacctactctaccaaca
gagtcagtgaattttactgaagtggaacaaatcaataacacattatatccccacacttct
caagtggaaagtacctcaaatgacaaaactgaagactctaacagaatggaaaatgtggca
aaagaagttggaccactcgtatctcaaacagacatctttgaaggtagtgggtcagtaacc
agcacaaccttaatagaaattttaagtgacactggagcagaaggacccacggtggcacct
ctccctttctccacggacatcggacatcctcaaaatcagactctcagatgggcagaagaa
atccagactagtagaccacaaaccataactgaacaagactctaacaagaattcttcaaca
gcagaaattaccgaaacaacaacctcgtccactgattttctggctagagcttatggtttt
gagatggccaaagaatttgttacatcagcaccaaaaccatctgacttgtattatgaacct
tctggagaaggatctggtgaggtggatattgttggttcatttcacacttctgcaactact
caggcaaccagacaagaaagcagcaccacatttgtttctgatgggtccctggaaaaacat
cctgaggtgccaagcgctaaagctgttactgctgatggattcccaacagtttcagtgttg
ctgcctcttcattcagagcagaacaaaagctcccctgatccaactagcacactgtcaaat
acagtgtcatatgagaggtccacagatggtagtttccaagaccatttcagggagtttgag
gattccaccttaaaaccgaacagaaaaaaacccactgaaaatattatcatagacctggac
aaagaggacaaggatttaatattgacaattacacagagtaccatccttgaaattctacct
gagctgacatcagataaaaatactatcatagatattgatcatactaaacctgtatatgaa
gacattcttggaatgcaaacagatatagatccagaggtaccatcagaaccacatgacagt
aatgatgaaaataatgatgacagcactcaagttcaagagacctatgaggcatctgtcaac
ctttctttaactgaggaaacatttgagggctctggtgatgttctggctagctacactcag
gcaacacatgatgaatcaatgacttatgaagatagaagccaactaggtcacatgggcttt
aacttcacaactgggatccctgctcctagcatggaaacagaattagacattttacttccc
atggcaacatccctgccaattcctcgtaagtctgccacggttattccagagattgaagga
ataaaagctgaagcaaaagccctggatgacatgtttgaatcaagcactttgtctgatggt
caagctattgcagaccaaagtgaaataataccaacattgggccaatttgaaaggacccag
gaggagtatgaagacaaaaagcacgctggtccttcttttcagccagaattcttttcagga
gctgaggaggcattagtagatcatcctccctatctaagtattgctactacccaccttatg
gatcggagtttaacagaggtgcctaaggtgatggaaggatccagtcccccgtattacact
gatacaacattagcagtttcaacacttgcaaagttgtcttctcagacgccatcatctcca
ctcactatctactcaggcagtgaagcctctggacacacagagatcccccagcccagtgct
ctgccagaaatagatgtcggctcatctgtaatgtctccacaggattcttttaaggaaatt
catgtaaatattgaagcaactttcaaaccatcaagtgaggaatatcttcacataactgag
cctacctctttatctcctgacacaaaattagaaccttcagaagatgatggtaaaccggag
ttattagaagaaatggaatcttctcccacagaacttattgctgtggaaggaactgagatt
ctccaagatttccaaaacaaaaccgatggtcaagtttctggagaagcaatcaagatgttt
cccaccattaaaacacccgaggctggaactgttattacaactgccgatgaaattaaatta
gaaggtgctacacagtggccacactctacttctgcttctgccacttatggggtcgaggca
ggtgtggtgccttggctgagtccacagacttctgagaggcccacgctttcttcttctcca
gaaataaaccctgaaactcaagcagctttaatcagagggcaggattccacaatagcagca
tcagaacagcaagtggcagcgagaattcttgattccaataatcaggcaacagtaagccct
gtggaatttaatactgaggttgcaacaccaccattttcccttctggagacttctaatgaa
acagatttcctgattggcattaatgaagagtcagtggaaggcacggcaatctatttacca
ggacctgatcgttgcaaaatgaacccgtgccttaatggaggcacctgttatcctactgaa
acttcctatgtatgcacctgtgtgccaggatacagtggagaccagtgtgaacttgatttt
gatgaatgtcactctaatccctgtcgtaatggagccacttgtgttgatggttttaacaca
ttcaggtgcctctgccttccaagttatgttggtgcactttgtgagcaagatacagagaca
tgtgactatggctggcacaaattccaagggcagtgctacaaatactttgcccatcgacgc
acatgggatgcagctgaacgggaatgccgtctgcagggcgcccatctcacaagcatcctg
tctcatgaagaacaaatgtttgttaatcgtgtgggccatgattatcagtggataggcctc
aatgacaagatgtttgagcatgacttccgctggaccgatggcagcacactgcaatatgag
aattggagacccaaccagccagatagcttcttttctgctggggaagactgtgttgtaatc
atttggcatgagaacggccagtggaatgatgttccctgcaattaccatctcacctatacg
tgcaagaaaggaacagttgcttgcggccagccccctgttgtagaaaatgccaagaccttt
ggaaagatgaaacctcgttatgaaatcaactccctgattagataccactgcaaagatggt
ttcattcaacgtcatcttccaactatccggtgcctaggaaatggaagatgggctatacct
aaaattacctgcatgaacccatctgcataccaaaggacttattctatgaaatactttaaa
aattcctcatcagcaaaggacaattcaataaatacatccaaacatgatcatcgttggagc
cggaggtggcaggagtcgaggcgctga
DBGET
integrated database retrieval system