Hylobates moloch (silvery gibbon): 116471457
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Entry
116471457 CDS
T08803
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116471457 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hmh03041
]
116471457 (DHX38)
Enzymes [BR:
hmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116471457 (DHX38)
Spliceosome [BR:
hmh03041
]
Complex C
Other components
Step II factors
116471457 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
116471457
NCBI-ProteinID:
XP_032013687
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MGDTSEDASIHRLEGTDLDCQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSKISSYKDWEESKDDQKDAEEEGGDQAGRNTRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSRDRDYDRKRDRDERDRSRHSS
RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWELPSPTPSYR
DSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREEG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKAVTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaccagtgaggatgcctcgatccatcgattggaaggcactgatctggactgt
caggttggcggtcttatttgcaagaccaaaagtgcggccagcgagcagcatgtcttcaag
gcccctgctccccgcccttcattactaggactggacttgctagcttccctgaaacggaga
gagcgagaggagaaggacgatggggaggacaagaagaagtccaaaatctcctcctacaag
gactgggaagagagcaaggatgaccagaaggatgctgaggaagagggcggtgaccaagct
ggccgaaatacccggaaagacagacattatcgatctgctcgggtagagactccatcccat
ccaggtggtgtgagcgaagagttttgggaacgcagtcggcagagagagcgggagcggcgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggattggaagaaggagaaatcgcgg
gatcgagactatgaccgcaagagggacagagatgagcgggatagaagtaggcacagcagc
agatcggagcgagatggagggtcagagcgtagcagcagaagaaatgaacccgagagccca
cgacatcgacctaaagatgcagccaccccttcaagatctacctgggaggaagaggacagt
ggctatggctcctcaaggcgctcacagtgggaattgccctctccgacgccttcctatcgg
gattctgagcggagccatcggctgtctactcgagatcgagacaggtctgtgaggggcaag
tactcagatgacacgcctctgccaactccctcctacaaatacaacgagtgggccgatgac
agaagacacttggggtccaccccgcgtctgtccaggggccgaggaagacgtgaggagggc
gaagaaggaatttcatttgacacggaggaggagcggcagcagtgggaggatgaccagagg
caagccgatcgggattggtacatgatggacgagggctatgacgagttccacaacccgctg
gcctactcctccgaggactacgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcagctcagcggagacagatcaatgaggataacgagcgctgggagacaaac
cgcatgcttaccagtggggtggtccatcggctggaggtggatgaggactttgaagaggac
aacgcggccaaggtgcatctgatggtgcacaatctggtgcctccctttctggatgggcgc
attgtcttcaccaagcagccggagccggtgattccagtgaaggacgccacttctgacctg
gccatcattgctcggaaaggcagccaaacagtgcggaagcacagggagcagaaggagcgc
aagaaggctcagcacaaacactgggaactggctgggaccaaactgggagatataatgggc
gtcaagaaggaggaagagccagataaagctgtgacggaggatgggaaggtggactacagg
acagagcagaagtttgctgatcatatgaagaaaaagagcgaagccagcagtgaatttgca
aagaagaagtccatcctggagcagaggcagtacctgcccatcttcgcagtgcagcaggag
ctgctcactattatcagagacaacagcatcgtgatcgtggttggggagacggggagtggt
aagaccactcagctgacacagtacctgcatgaagatggttacacggactatgggatgatt
ggatgtacccagccccggcgtgtagctgccatgtcagtggccaagagagtcagtgaagag
atggggggaaaccttggcgaggaggtgggctatgccatccgctttgaagactgcacttca
gagaacaccttgatcaaatacatgactgacgggatcctgctccgagagtccctccgggaa
gccgacctggatcactacagtgccatcatcatggacgaggcccacgagcgctccctcaac
actgacgtgctctttgggctgctccgggaggtagtggctcggcgctcagacctgaagctc
atcgtcacatcagccacgatggatgcggagaagtttgctgccttttttgggaatgtcccc
atcttccacatccctggccgtaccttccctgttgacatcctcttcagcaagaccccacag
gaggattacgtggaggctgcagtgaagcagtccttgcaggtgcacctgtcgggggcccct
ggagacatccttatcttcatgcctggccaagaggacattgaggtgacctcagaccagatt
gtggagcatctggaggaactggagaatgcgcctgccctggctgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatcttccagaaggctccagatggcgttcggaag
tgcatcgttgccaccaatattgccgagacgtctctgactgttgatggcatcatgtttgtt
attgattctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctatcccattagccaggccaatgccaaccagcggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacacccagagcgcctacaagaatgagctcctgacc
accacggtgcccgagatccagaggaccaacctggccaacgtggtgctgctgctcaagtcc
ctcggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactctatgtatcagctctggatcctcggggccctggacaacacaggtggtctgacc
tctaccgggcggctgatggtggagttcccgctggaccctgccctgtccaagatgctcatc
gtgtcctgtgacatgggctgcagctccgagatcctgctcatcgtctccatgctctcggtc
ccagccatcttctacaggcccaagggtcgagaggaggagagtgatcaaatccgggagaag
ttcgctgttcctgagagcgatcatttgacctacctgaatgtctacctgcagtggaagaac
aataattactccaccatctggtgtaacgatcatttcatccatgctaaggccatgcggaag
gtccgggaggtgcgagctcaactcaaggacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcactgactgggacattgtcaggaagtgcatctgtgctgcctatttccaccaa
gcagccaagctcaagggaatcggggagtacgtgaacatccgcacagggatgccctgccac
ttgcaccccaccagctccctttttggaatgggctataccccagattacatagtgtatcac
gagttggtcatgaccaccaaggagtacatgcagtgcgtgaccgctgtggacggggagtgg
ctggcggagctgggccccatgttctatagtgtgaaacaggcgggcaagtcacggcaggag
aaccgtcgtcgggccaaagaggaagcctctgccatggaggaggagatggcactggccgag
gagcagctgcgagcccggcggcaggagcaggagaagcgcagccccctgggcagtgtcagg
tctacgaagatctacactccaggccggaaagaacaaggggagcccatgacccctcgccgc
acgccagcccgctttggtctgtga
DBGET
integrated database retrieval system
