Hylobates moloch (silvery gibbon): 116473573
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Entry
116473573 CDS
T08803
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116473573 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmh03019
]
116473573 (PNLDC1)
Enzymes [BR:
hmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
116473573 (PNLDC1)
Messenger RNA biogenesis [BR:
hmh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116473573 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
116473573
NCBI-ProteinID:
XP_032017745
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGADEFEESLPLLQELVQEADFVGLDMEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSAVEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSTPDKDQIKVVIDEVTRWLDLAKEGDW
MTLPGITGFQAFEVQLVLRQALPNIWTVLKDEGVLVKKVSKQHRRYLQNTSCDRESCWKE
NILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQSIHRLFPV
LIDTKSVTKDIWKEMNFPRVSNLSEVYEVLNSDLNPTKNSGPEIVHASRCEKYVETKCPH
EAAYDAFLCGSVLLKVAHLLLQKIHRIDPVPESSFPQYLDVLAPYVNQVNLIRAGVPKIN
FSGPDYPSFRPPILILSVKRWPGVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDAR
NILKEYRGHPTLCISLYHYWRHSPNVNCLLQVCGIVTAWALLAFILGRSGP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgaggagagcctccctctgctgcaggagctcgtccag
gaggccgacttcgtgggtctggacatggagttcacgggccttcgttctaacctgtctggg
ccccagcagatcagtctttttgatttgccatcggagtggtatctaaagacccgtcagagt
gttcagcaatttacaatctgtcagattggattgtctgtgttttctgctgttgaaggagag
gcaaacaagtatatagcccattcgtgtaacttctatctcttccctacaacgtttgggatt
ttggactcagaattctctttccaggcttccagtgttcagtttttgaatcagtatggcttc
aactataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attagacacgatatcctgactgggaactggagagttcgcagcactccggataaagaccaa
atcaaggtggtgattgacgaggtgacgcggtggctggacctggccaaggaaggtgactgg
atgactcttcctgggatcactggcttccaggcctttgaggtccagctggtgctgaggcag
gccctccccaacatctggacggtgctgaaagatgagggggtgctagtgaagaaagtgagt
aaacaacatcgtcggtatcttcagaacacctcttgtgaccgagagagctgttggaaggaa
aacattcttctctcagcaaggggtttttctgtctttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgcacctccatgagaagttcttc
agacccctcccagaaagctacgatcaatttaagcagagtatccacaggctgtttcctgtt
ctcattgataccaagagcgtaacaaaggatatctggaaggagatgaatttcccgagggtg
tcgaatctttccgaagtctatgaagtcctgaacagtgacttgaatcccaccaagaattct
ggaccagagattgttcacgcaagcaggtgtgagaaatacgttgagacaaagtgcccccac
gaagccgcgtatgatgccttcctctgtgggtcagttcttttgaaagtggcacacttgctt
ctacagaagatacaccgcatcgaccctgtgcccgagtcgtcctttcctcagtaccttgat
gtgctggctccttacgtgaaccaagtgaacctcatccgagcgggggtcccgaagatcaat
ttttctggtccagattatcccagtttccgacctcccatcctcatcctcagcgtcaaaagg
tggcctggggtcagcgagcagcaagtctaccataagtttcagaatctctgcaagtttgat
gtcaggcgactcacaagaagccagttcttactcctgaccaataagtttaaggacgcgcgg
aacatcctgaaggagtaccggggccacccgaccctgtgcatctccctgtaccactactgg
aggcactccccaaacgtcaactgcctgctccaagtctgtggcatagtgactgcctgggcc
cttcttgcgttcatcctcggaaggtctggtccctga
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