Hylobates moloch (silvery gibbon): 116474488
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Entry
116474488 CDS
T08803
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116474488 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmh03400
]
116474488 (LIG3)
Enzymes [BR:
hmh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
116474488 (LIG3)
DNA repair and recombination proteins [BR:
hmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
116474488 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
116474488
NCBI-ProteinID:
XP_032018857
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MSLAFKILFPQTLCALSRKELCLFRKHHWPDVRQFSQWSETDLLHGHPLFLRRKPVLSFQ
GSHLRSRATCLVFLPGLHVGRCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSEAGGDMKEWYHIKCMFEKLERARASTKKIEDLTELEGWEELEDNEKEQITQH
IADLSSKAAGTPKKKAIVQAKLTTTGQVTSPVKGTSFVTSTNPRKFSGFSAKPNNSAPLS
PTPKRSLSSSKCDPRHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGD
VYLTVKLLLPGVIKTIYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSK
SFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKM
NSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQ
PMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFK
DYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFND
VSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRVIREGLEGLVLKDV
KGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGSQK
WCTVTKCAGGHDDATLTRLQKELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAAVW
EITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTVVA
GDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGELSNSNSKDGNMLTAKPSAM
KAGEKLAMKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAF
NGDLVQEFDMTSATHVLGSRDKNPVAQQVSPEWIWACIRKRRLVAPC
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctttcaagatcctctttccacaaaccctctgtgcactcagccgaaaagaa
ctgtgcctattccgaaaacatcactggcctgatgtaagacaattcagccagtggtcagaa
acagatctgcttcatggacatcctctcttcctgagaagaaagcctgttctatcattccag
ggaagccatctaagatcacgtgccacctgccttgttttcttgccagggttgcatgtggga
cgctgcagtggcccctgtgagatggctgagcaacggttctgtgtggactatgccaagcgt
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcgtatgccgaattggc
aaagtggtgcccaatcccttctcagaggctgggggtgatatgaaagagtggtaccacatt
aaatgcatgtttgagaaactagagcgggcccgggcctccacaaaaaaaatcgaggacctc
acagagctggaaggctgggaagagctggaagataatgagaaggaacagataacccagcac
attgcagatctgtcttctaaggcagcaggtacaccaaagaagaaagctattgtccaggct
aagctgacaaccactggccaggtgacttctccagtgaaaggcacctcatttgtcaccagt
accaatccccggaaattttctggcttttcagccaagcccaacaactctgcccccttgagc
cccacccctaagagaagtctgtcttcaagcaaatgtgaccccaggcataaggactgtctg
ctacgggagtttcgaaagttatgcgccatggtggccgataatcctagctacaacacgaag
acccagatcatccaggacttcctgcggaaaggctcagcaggagatggtttccacggtgat
gtgtacctaacagtgaagctgctgctgccaggagtcattaagactatttacaacttgaat
gataagcagattgtgaagcttttcagtcgcatttttaactgcaacccagatgatatggca
cgggacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcagagcaag
tctttccccccagctgccaagagcctccttaccatccaggaagtggatgagttccttctg
cggctgtccaagctcaccaaggaggatgagcagcaacaggccctacaggacattgcctcc
aggtgtacagccaatgaccttaaatgcatcatcaggttgatcaaacatgatctgaagatg
aactcaggtgcaaaacatgtgttagacgcccttgaccccaatgcctatgaagccttcaaa
gcctcacgcaacctgcaggatgtggtggagcgagtccttcacaatgcgcaggaggtggag
aaggagccgggccagagacgagctctgagcgtccaggcctcactgatgacacctgtgcag
cccatgctggcggaggcctgcaagtccattgagtatgcgatgaagaaatgtcccaatggc
atgttctctgagatcaagtacgatggagagcgagtccaggtgcataagaatggagaccac
ttcagctacttcagccgcagtcttaagcccgtcctgcctcacaaggtggcccactttaag
gactacattccccaggcttttcctgggggccacagcatgatcttggattctgaagtgctt
ctgattgacaacaagacaggcaaaccactgccctttgggactctgggagtgcacaagaaa
gcagccttccaggatgctaatgtttgcctgtttgtttttgattgtatctactttaatgat
gtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgacaacatggtt
gaaattccaaaccggataatgttctcagaaatgaagcgagtcacaaaagcttcggacttg
gctgacatgataacccgggtgatccgggagggattggaggggctggtgctgaaggatgtg
aagggtacatatgagcctgggaagcggcactggctgaaagtgaagaaagactatttgaac
gagggggccatggccgacacagctgacctggtggtccttggggccttctatgggcaaggg
agcaaaggcggcatgatgtcaatcttcctcatgggctgctacgaccctggcagccagaag
tggtgcacagtcaccaagtgtgcaggaggccatgatgatgccacgcttacccgcctgcag
aaggaactagacatggtgaagatcagcaaggaccccagcaaaatacccagctggctgaag
gtcaacaagatctactatcctgacttcatcgtcccagacccaaagaaagctgccgtgtgg
gagatcacaggggctgaattctccaaatcagaggctcacacagctgacgggatctccatc
cgattccctcgctgcacccgaatccgagatgataaggactggaaatctgccactaacctt
ccccaactcaaggaattgtaccagttgtccaaggagaaggcagacttcactgtagtggct
ggagatgaggggagctccactacagggggtagcagtgaagagaataagggtccctcaggg
tctgctgtgtcccgcaaggcccccagcaagccctcagccagtaccaagaaagcagaaggg
gagctgagtaactccaacagcaaagacggcaacatgctgactgcaaagccttctgctatg
aaggcgggagagaagctggccatgaagtcttctccagtgaaagtaggggagaagcggaaa
gctgctgatgagaccctgtgccaaacaaaggtactgctggacatcttcactggggtgcgg
ctttacttgccaccctccacaccagacttcagccgtctcagacgctactttgtggcattc
aacggggacctggtacaggaatttgatatgacctcagccacacacgtgttgggtagcagg
gacaagaaccctgtggcccagcaggtctccccagagtggatttgggcatgtatccggaaa
cggagactcgtagctccctgctag
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