Hylobates moloch (silvery gibbon): 116476761
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Entry
116476761 CDS
T08803
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X2
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116476761 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmh03021
]
116476761 (PCF11)
03019 Messenger RNA biogenesis [BR:
hmh03019
]
116476761 (PCF11)
Transcription machinery [BR:
hmh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116476761 (PCF11)
Messenger RNA biogenesis [BR:
hmh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
116476761 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
116476761
NCBI-ProteinID:
XP_032022929
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIAPMAVKAPHQVPVQSEKSRPGTSLQIQDLKGTNRDPRLN
RISQHSHGKDQSHRKEFLMNTLNQSDTKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHTKSSEHRLAGSRNKIINGIVQKQDTIIEESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPSSTPKAGKIRQSGTKQSHMEEFTPPSRE
DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG
WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQEDFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMI
FEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQ
PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSF
NQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHY
FDEKNLQSSQFGNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQ
NPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATAQASEVAAQPPPEEEEDQ
NEDQDVPDLTNFTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQN
RTEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEF
QSVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFD
CTPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKTEN
DTVESV
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaagccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactaggaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctgccccccaatgtgaatacgtctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaggagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacagaagaatcttacacaa
gaacaactaataaggcaacagttactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggaaacatccaatttaggtcctggatctgcaccatccaaattacatgtttcacag
attgcccctatggcagttaaagctcctcatcaggttcctgtgcaatctgagaaaagccgt
ccaggaacatccttacaaattcaggatttgaaaggaactaaccgggatcctcgtctgaac
aggataagccaacattctcatggaaaagatcaaagtcacaggaaagaatttctaatgaac
acattaaaccagtctgatactaagacaagtaaaactataccctctgaaaaactaaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccaatta
gattctaaatcgaaatcgaaatcgaaatcaccatcacctttgaaaaacaaattatctcac
acaaaagacttgaaaaatcaagaatcggaaagtatgaggttgtctgatatgaacaagaga
gatccaagattaaaaaaacatcttcaggataagaccgacggcaaagatgatgatgtgaaa
gagaagagaaaaactgcagaaaaaaaggataaagatgagcacacgaagtcatctgaacac
agactggctggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacaata
atagaagagtcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctaggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaaacgaaggcaaagaagtatgtctccatcatcgacacctaaagctggaaag
attcgccaatctggaactaagcagtcacatatggaagagtttacaccaccttctagggaa
gacagaaatgctaagagaagtactaaacaggatattcgggatccaaggcgaatgaaaaag
actgaagaggagcgaccacaagaaactacaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaactggcaaagttccaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacaacaggttgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagcactaaaggaattttatcacctcgagccccaaagcagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggaa
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagagatctccattcaatgat
cgttttccacttaagcgacctcgatatgaagattcagataaaccatttgtagatagccca
gcatcaagatttgccggcttggatacaaatcagcgacttacagctttagctgaagacaga
ccgttatttgatggacctagtaggccatcagtagcaagagatggcccaacaaagatgatt
tttgaaggacctaataaattaagccctcgaattgatggacctcccacaccagcttctctt
cggtttgatgggtcaccaggacaaatggggggagggggccctttgagatttgagggacca
caaggtcagctaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagtgggg
acacctttgcggtttgagggcccaattggtcaagcaggaggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggtttgcgatttgagggaccagga
ggccagcctgtgggtggtttgaggtttgagggacatcgtggtcaacctgtgggtggtcta
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagcctgtaggtggacttagatttgaggggggtcatggtccatcaggggctgcgattagg
tttgatggacctcatggtcagccaggaggtggaatcagatttgagggccctttgctacag
caaggggttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgagattt
gagggacaacataatcaacttggtgggaaccttaggtttgagggtccacatggtcaacca
ggggttggtatcaggtttgaaggccctttagtccaacaaggaggtggaatgaggtttgag
ggtccttctgtaccaggaggtggactgagaattgaagggcctctgggccaaggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccgtcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaaggactcctggtcag
ccaggcccccagaggtttgatggaccacctggacagcaggttcaacccagatttgacggt
gtacctcaaagatttgatggtccacaacatcagcaagcatcaaggtttgatattcctctt
ggtcttcaaggcacaagatttgacaatcatccttcacaaaggcttgaatcagtatctttc
aatcagactggtccatataatgatccacctggcaatgcttttaatgccccatcccaagga
ctacagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatgga
ccacatggccctggaaaccagagtttctctaatccacttaacagagcttctggacactat
tttgatgaaaaaaatcttcagagttctcagtttggaaattttggcaatatacctgctcca
atgacagtaggaaatattcaggcatctcaacaggttctgagtggtgttgctcagccagta
gcttttggtcaaggacaacagtttttaccagttcatccacaaaatcctggatttgttcag
aatccttcaggagccctccctaaggcatatcctgataatcatctcagtcaggtggatgta
aatgaattgttttcaaaattgctaaaaacaggaattctcaaattgtcccaacccgattca
gctacagcacaagcaagtgaagtagctgctcagcctccccctgaagaggaggaagatcaa
aatgaagatcaagatgttccagatcttactaattttacagttgaagaattgaaacaacgt
tatgacagtgttatcaatcgactgtacactggtattcagtgttactcttgtggaatgagg
tttacaacatcacagacagatgtttatgcggatcatttggactggcattatcggcaaaat
agaactgaaaaggatgttagcagaaaagtcactcatagacgttggtactacagtttaaca
gactggatagaatttgaggagatagctgatctggaagaacgggcaaagagccagtttttt
gaaaaggtgcatgaagaagttgtgctcaaaactcaagaggctgctaaagaaaaagagttc
caaagtgtacctgctggaccagctggagcagttgagagttgtgaaatctgtcaagaacaa
tttgaacaatactgggatgaagaagaggaggaatggcatttgaaaaatgctattagagta
gatggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgat
tgtacaccatctcccagcaagacaccagttgaaaaccctttgaatattatgttgaacatt
gtcaaaaacgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacgaattgat
acaccaccagcttgtacagaggaaagcatagcaacaccctctgaaattaaaacagaaaat
gacacagtcgagtcagtttaa
DBGET
integrated database retrieval system
