Hylobates moloch (silvery gibbon): 116810714
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Entry
116810714 CDS
T08803
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
hmh
Hylobates moloch (silvery gibbon)
Pathway
hmh04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
hmh00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
116810714 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hmh04040
]
116810714 (SCN1A)
Ion channels [BR:
hmh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116810714 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Neur_chan_memb
New_glue
FUT8_N_cat
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
116810714
NCBI-ProteinID:
XP_032611409
LinkDB
All DBs
Position
Unknown
AA seq
1866 aa
AA seq
DB search
MLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLEDFTFLRDPWN
WLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRNKCIQWPPTNASLEEHSIEKNITVNYNGTLINETVFE
FDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYMCVKAGRNPNYGYTSFDTFSWA
FLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEEQNQ
ATLEEAEQKEAEFQQMIEQLKKQQEAAQAATATASEHSREPSVAGRLSDSSSEASKLSSK
SAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEGNRLTYEKRYSSP
HQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDNESRRDSLFVPR
RHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVPTSPVGQLLPEGT
TTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQKCPPCWYKFSN
IFLIWDCSPYWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTDHFNNVLTVG
NLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLANVEGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKI
ASDCQLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTVFMMVMVIGNLVV
LNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGVAYVKRKIYEFIQQSFIRKQK
ILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVNGTTSGIGTGSSVEKYIIDESDYM
SFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSSSEGSTVDIGAPA
EEQPVVEPEETLEPEACFTEGCVQRFKCCQINVEEGRGKQWWNLRRTCFRIVEHNWFETF
IVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNA
WCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGA
IPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGDRFDIEDVNNHTDCLKLIERN
ETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPKYEESLYMYLYF
VIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPI
PRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEYVTTILSRINLVFIVL
FTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLFRVIRLARI
GRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDD
MFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSVKGDCGNPSVGI
FFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFM
EFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMD
ALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFTYN
KNKIKGGANLLIKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTKPIVEKHEQEGKD
EKAKGK
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgctaattatgtgcactattttgacaaactgtgtgtttatgacaatgagtaaccctcct
gattggacaaagaatgtagaatacaccttcacaggaatatatacttttgaatcacttata
aaaattattgcaagaggattctgtttagaagattttactttccttcgggacccatggaac
tggctcgatttcactgtcattacatttgcgtacgtcacagagtttgtggacctgggcaat
gtctcggcattgagaacattcagagttctccgagcattgaagacgatttcagtcattcca
ggcctgaaaaccatcgtgggagccctgatccagtctgtgaagaagctctcagatgtaatg
atcctgactgtgttctgtctgagcgtgtttgctctaattgggctgcagctgttcatgggc
aacctgaggaataaatgtatacaatggcctcccaccaatgcttccttggaggaacatagt
atagaaaagaatataactgtgaattataatggtacacttataaatgaaactgtctttgag
tttgactggaagtcatatattcaagattcaagatatcattatttcctggagggtttttta
gatgcactactatgtggaaatagctctgatgcaggccaatgtccagagggatatatgtgt
gtgaaagctggtagaaatcccaattatggctacacaagctttgataccttcagttgggct
tttttgtctttgtttcgactaatgactcaggacttctgggaaaatctttatcaactgaca
ctacgtgctgctgggaaaacgtacatgatattttttgtgctggtcattttcttgggctca
ttctacctaataaatttgatcctggctgtggtggccatggcctacgaggaacagaatcag
gccaccttggaagaagcagaacagaaagaggccgaatttcagcagatgatcgaacagctt
aaaaagcaacaggaggcagctcaggcagcaacggcaactgcctcagaacattccagagag
cccagtgtagcaggcaggctctcagacagctcatctgaagcctctaagttgagttccaag
agtgctaaggaaagaagaaatcggaggaagaaaagaaaacagaaagagcaatctggtggg
gaagagaaagatgaggatgaattccataaatctgaatctgaggacagcatcaggaggaaa
ggttttcgcttctccattgaagggaaccgactgacatatgaaaagaggtactcttcccca
caccagtctttgttgagcatccgtggctccctattttcaccaaggcgaaatagcagaaca
agccttttcagctttagagggcgagcaaaggatgtgggatctgagaacgacttcgcagat
gatgagcacagcacctttgaggataacgagagtcgtagagattccttgtttgtgccccga
cgacatggagagagacgcaacagcaacctgagtcagaccagtaggtcatcccggatgctg
gcagtgtttccagcgaatgggaagatgcacagcactgtggattgcaatggtgtggtttcc
ttggttggtggaccttcagttcctacatcgcctgttggacagcttctgccagagggaaca
accactgaaactgaaatgagaaagagaaggtcaagttctttccacgtttccatggacttt
ctagaagatccttcccaaaggcaacgagcaatgagtatagccagcattctaacaaataca
gtagaagaacttgaagaatccaggcagaaatgcccaccctgttggtataaattttccaac
atattcttaatctgggactgttctccatattggttaaaagtgaaacatgttgtcaacctg
gtcgtgatggacccatttgttgacctggctatcaccatctgtattgtcttaaatactctt
ttcatggccatggagcactatccaatgacagaccatttcaataatgtgcttacagtagga
aacttggttttcactgggatctttacggcagaaatgtttctgaaaattattgccatggat
ccttactattatttccaagaaggctggaatatctttgatggttttattgtgacgcttagc
ttggtagaacttggactcgccaatgtggaaggattatctgttctccgttcatttcgattg
ctgcgagttttcaagttggcaaaatcttggccaacgttaaatatgctaataaagatcatc
ggcaattccgtgggggctctgggaaatttaacccttgtcttggccatcatcgtcttcatt
tttgccgtggtcggcatgcagctctttggtaaaagctacaaagactgtgtctgcaagatc
gccagtgattgtcaactcccacgctggcacatgaatgacttcttccactccttcctgatc
gtgttccgcgtgctgtgtggggagtggatagagaccatgtgggactgtatggaggttgct
ggtcaagccatgtgccttactgtctttatgatggtcatggtgattggaaacctagtggtc
ctgaatctctttctggccttgcttctgagctcatttagtgcagacaaccttgcagccact
gatgatgataatgaaatgaataatctccaaattgctgtggataggatgcacaaaggagta
gcttatgtgaaaagaaaaatatatgaatttattcaacagtccttcattaggaaacaaaag
attttagatgaaattaaaccacttgatgatctaaacaacaagaaagacagttgtatgtcc
aatcatacaacagaaattgggaaagatcttgactatcttaaagatgtaaatggaactaca
agtggtataggaactggcagcagtgttgaaaagtacattattgatgaaagtgattacatg
tcattcataaacaatcccagtcttactgtgactgtaccaattgctgtaggagaatctgac
tttgaaaatttaaacacggaagactttagtagtgaatcggatctagaagaaagcaaagag
aaactgaatgaaagcagtagctcatcagaaggtagcactgtggacattggcgcacctgca
gaagaacagcctgtagtggaacctgaagaaacccttgaaccggaagcttgtttcactgaa
ggctgtgtacaaagattcaagtgttgtcaaatcaacgtggaagaaggcagaggaaaacaa
tggtggaacctgagaaggacgtgtttccgaatagttgaacataactggtttgagaccttc
attgttttcatgattctccttagtagtggtgctctggcatttgaagatatatatattgat
cagcgaaagacgattaagacgatgttggaatatgctgacaaggttttcacttacattttc
attctggaaatgcttctaaaatgggtggcatatggctatcaaacatatttcaccaatgcc
tggtgttggctggacttcttaattgttgatgtttcattggtcagtttaacagcaaatgcc
ttgggttactcagaacttggagccatcaaatctctcaggacactaagagctctgagacct
ctaagagccttatctcgatttgaagggatgagggtggttgtgaatgcccttttaggagca
attccatccatcatgaatgtgcttctggtttgtcttatattctggctaattttcagcatc
atgggcgtaaatttgtttgctggcaaattctaccactgtattaacaccacaactggtgac
aggtttgacatcgaagacgtgaataatcatacagattgcctaaaactaatagaaagaaat
gagactgctcgatggaaaaatgtgaaagtaaactttgataatgtaggatttgggtatctc
tctttgcttcaagttgccacattcaaaggatggatggatataatgtatgcagcagttgat
tccagaaatgtggaactccagcctaagtatgaagaaagtctgtacatgtatctttacttt
gttattttcatcatctttgggtccttcttcaccttgaacctgtttattggtgtcatcata
gataatttcaaccagcagaaaaagaagtttggaggtcaagacatctttatgacagaagaa
cagaagaaatactacaatgcaatgaaaaaattaggatcaaaaaaaccgcaaaagcctata
cctcgaccaggaaacaaatttcaaggaatggtctttgacttcgtaaccagacaagttttt
gacataagcatcatgattctcatctgtcttaacatggtcacaatgatggtggaaacagat
gaccagagtgaatacgtgactaccattttgtcacgaatcaatctggtgttcattgtgctg
ttcactggagagtgtgtactgaaactcatctctctacgccattattattttaccattggc
tggaatatttttgattttgtggttgtcattctctccattgtaggtatgtttcttgccgag
ctgatagaaaagtatttcgtgtcccctaccctgttccgagtgatccgtcttgccaggatt
ggccgaatcctacgtctgatcaaaggagcaaaggggatccgcacgctgctctttgctttg
atgatgtcccttcctgcattgtttaatattggcctcctgctcttcctggtcatgttcatc
tacgccatctttgggatgtccaactttgcctatgttaagagggaagttgggatcgatgac
atgttcaactttgagacctttggcaacagcatgatctgcctgttccaaattacaacctct
gccggctgggatggattgctagcacccattctcaacagtaagccacccgactgtgaccct
aataaagttaaccctggaagctcagttaagggagattgtgggaacccatctgttggaatt
ttcttttttgtcagttacatcatcatatccttcctggttgtggtgaacatgtacatcgcg
gtcatcctggagaacttcagtgttgctactgaagaaagtgcagagcccctgagtgaggat
gactttgagatgttctatgaggtttgggagaagtttgatcccgatgcaactcagttcatg
gaatttgaaaaattatctcagtttgcagctgcgcttgaaccgcctctcaatctgccacaa
ccaaacaaactccagctcattgccatggatttgcccatggtgagtggtgaccggatccac
tgtcttgatatcttatttgcttttacaaagcgggttctaggagagagtggagagatggat
gctctacgaatacagatggaagagcgattcatggcttccaatccttccaaggtctcctat
cagccaatcactactactttaaagcgaaaacaagaggaagtatctgctgttattattcag
cgtgcttacagacgccaccttttaaagcgaactgtaaaacaagcttcctttacgtataat
aaaaacaaaatcaaaggtggggctaatcttcttataaaagaagacatgataattgacaga
ataaatgaaaactctattacagaaaaaactgatctgaccatgtccactgcagcttgtcca
ccttcctatgaccgggtgacaaagccaattgtggaaaaacatgagcaagaaggcaaagat
gaaaaagccaaagggaaataa
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integrated database retrieval system
