Hydrocarboniclastica marina: soil367_00880
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Entry
soil367_00880 CDS
T06192
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmi03009
]
soil367_00880
Enzymes [BR:
hmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
soil367_00880
Ribosome biogenesis [BR:
hmi03009
]
Prokaryotic type
rRNA helicases
soil367_00880
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QCF24621
UniProt:
A0A4P7XCT1
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All DBs
Position
185521..186906
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AA seq
461 aa
AA seq
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MTDNAFSTLPIRKDLLENLEALGFSAMTPVQAKSLPPILAGRDVLAQAKTGSGKTAAFGV
GLLSRLAAEEFAVQALVLCPTRELADQVGKELRRLARFTANVKVLTLCGGTPLGPQIGSL
AHGAHVVVGTPGRIQDHLQKGSLTLDALRVLVLDEADRMLDMGFAPALDVIVAACPRERQ
TLLFSATYPKAIGAISARVQNDPVEVVVESQHDTAQIQQHFYEVPTTDAKLPALKALLSH
FKPVSSVIFCNTRKDCQHLHQQLSAEGLSVTTLHGDLEQRDRDQVLVRFANRSVSLLVAT
DVAARGLDIKELDAVINYELPRDPEVYVHRIGRTGRAGEKGLALSLVQPSETHRVQRVQD
YQQKPAHWSDLNKLEPDPAFRLIPEMVTLGLDSGRKNKLRPGDIVGALTGDAGIAGDQIG
KIDVFDFQAYVAVARGSAKQALAGLESGKIKGRKVKVRRIT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaacgccttctcaaccttgccaatccgaaaagacctgctggaaaacctggag
gcgctgggcttctcggccatgacgccggtccaggccaaaagtctgccgcctattctcgcc
ggcagagacgttctcgcccaggcaaagacgggcagcggtaaaacggcggcttttggggtt
ggcctcctgagccgactggcggcggaggaattcgccgtacaggcgctggtactctgtccc
acacgggaactggccgatcaggtgggcaaggagttgcggcggctggcccggttcaccgcg
aacgtcaaggtactgaccctgtgcgggggcacacccctgggaccacagataggctcactg
gcacacggtgcgcatgtcgttgtcggcacacccggtcgtatccaggatcacctgcagaaa
ggttcgctgacgctggatgcgctcagggtcctggtgctggatgaagccgatcgcatgctg
gacatgggcttcgccccggccctggatgtgatcgtcgccgcctgtccgcgagaacgccaa
accctgcttttttccgccacgtaccccaaggccattggggcgatcagtgcccgcgtacag
aatgacccggtagaggttgtggtcgagtcccagcatgataccgcccagattcaacagcat
ttctacgaagttcccacgacagatgccaagctgccggcactcaaagcgttgctgagtcac
ttcaagccagtctccagtgtcattttctgcaatacccgcaaggactgccagcacctgcac
cagcaattgtcggccgaagggctatctgtaacgacactgcatggcgaccttgagcagagg
gaccgggatcaggtgctggtgcgcttcgccaaccgcagcgtctctctgctggtggccacg
gacgttgccgcacgcgggctggatatcaaggaactggatgcggtaatcaactatgaactg
ccccgggatcccgaggtgtacgtgcaccgcatcggtcgcactggccgggctggagagaaa
ggtctggcgctgagtctggttcagccgtcggaaacgcatcgggtgcagcgagtgcaagac
taccagcaaaagcctgcgcactggtccgacctcaacaagctagagcccgacccggccttc
cgcctgatcccggagatggtcacgctggggctcgatagcggtcgtaagaataagctgcgc
ccgggggatattgtcggtgcgttgaccggtgacgccggtatcgcgggcgaccagatcggc
aaaattgacgtttttgattttcaggcttacgtagcggtggctcgcggtagcgccaagcag
gcgttggcagggctggagtctggcaaaatcaaaggcagaaaggtcaaggtccgccgtata
acctga
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