KEGG   Hydrocarboniclastica marina: soil367_01460
Entry
soil367_01460     CDS       T06192                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    soil367_01460 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hmi02044]
    soil367_01460 (icmF)
Secretion system [BR:hmi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   soil367_01460 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: QCF24727
UniProt: A0A4P7XG44
LinkDB
Position
313285..316794
AA seq 1169 aa
MKSMAWIRRLGAMVTLRGLFLALGVVAVLLLIWYGGPLVAVAGWAPLESGPARAIFLLLL
VVGWLGRHLWQLKRLRQDNEKVVSEMMVGNEKDALLKEEVDTQRERMREALSLIKKWRPG
TLSSVYQLPWYMIIGAPGSGKSTALLNSGLEFPLKDEMGIDAVRGVGGTRYCDWWFTNRA
VIIDTAGRYTTQESADKRDARGWNSFLGLLKKYRPRQPINGVILSVSVADLLEQTPTEQL
LHARALKQRVQELKNRLGVIFPVYLVLTKFDLLEGFTDTFGMLSEQEREEVFGITFELES
VSDSKSLPVVFEQEFNGFLERLSQFLLHRLQQERTPLTRRRIYQFPKQAALLQAPLWNLV
KEVFFPSAYEDVPLIRGIYMVSSEQGKQPFDKVSQLVDGQFSLKTVKPAVTPALAQDGFF
LRRLFDRIIFAEHGLATTESRKERRFVWARRGTFAAMVVVTLGASAAGYMSFQWNAGLLE
EYQQETAELKIELSQPQLDWIRLDALLTKAASMPGVLDAPLPEGGPRQLGLYQGDALAEE
AEGAYGRLLQGRFGGMLKETLEIEIGRNLGNLEYLYETLKTYLMLGDPQYLDRDQVHAWL
GFILSRQLAGQINTETRESLLQHSRHYLDTEAPMPTDAGLIARARQELTALPLAERAYQR
IKVDASQSRLPDFRLPMVMGSVAELVFERRSGASLREGVPGLYTLNGYRALFEPEKNKLV
GRLLEDSWVYGEGAKDFGTLDENEIMAGVEERYFRDYVHYWQGFLKDLRVKPFSDQRGGM
RVAQLLAGPEAPLARLHAAVKHNTTLTRESPESVALQAAAGVAKNRATQRQQELGNLMGM
MSGEEAPEPTFVDQTFDGINELDSGALEDIQAHAGLIARYLEEQSAGRPDALTTVTRSQF
DEAIKGVFSTANQTDPDFLPSLLGGFVNDSRRLVKVSVTRKLNDIWRSTVYADYKKAIAG
HYPFVAESDSEVALMDFANFFGYGGVLDRFFEDHLQGHVDTDRSPWRLTSDVGINQSSLR
LFESAVRIREAFFAPGSRQPSVSFTLTPVYLDSRVAQVLLEMDGQVLVYRHGPPRPVVFT
WPKGSGSGTTRLAVTPVDDTGRSVQTTYQGAWSLFRMLRDTGGMAGGARQQNIEIALDKY
LANLELVTESVKHPFNTAMLESFRLPPTL
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgaaaagcatggcatggatacgccggctgggagcaatggtgacgctgcgcgggctcttc
ctggcgcttggcgttgtggctgtacttctccttatctggtacggcggccctttagtcgcg
gtagcaggttgggcgccgctggagtcagggccggcgcgggcgatttttctcctgcttctg
gtcgttggttggctggggcgccacctttggcagctcaagcgcctgcgccaggacaatgag
aaggtcgtcagcgagatgatggtcggtaatgaaaaggacgcgctactgaaggaggaggtg
gatacccagcgggaacgaatgcgcgaggctcttagcctgattaaaaagtggcggccgggc
accctgagttcggtgtatcagctgccctggtacatgattatcggcgccccggggtccggc
aagtccacggcattgctgaactcaggccttgaattcccgctcaaggatgagatgggtatc
gacgcggtgaggggtgtgggtggtacgcgttattgcgattggtggttcaccaaccgagcg
gtcatcatcgacaccgcgggccgctacaccactcaggaaagcgccgacaaacgcgacgcc
cgtggctggaactcatttctcggtcttcttaaaaagtaccggccacgccagccgataaac
ggggtcattctctcagtcagcgtggcagaccttctggagcagacaccgaccgagcaattg
ctccatgcccgggcgttaaagcaacgcgtccaggagcttaagaatcgcctgggagtgatt
ttcccggtctatctggtgctgaccaaattcgacctgctggaagggttcaccgacaccttc
gggatgctttcggagcaggaaagggaagaagttttcgggattacctttgagctagagtcc
gttagcgattccaaatcattgccagtcgtcttcgagcaggagtttaacggctttctcgag
cggctcagccagttccttctgcaccgtctgcagcaggagcgcactccgctgacgcggcgg
cgcatctatcagttccccaaacaggcggcccttctccaagcgccgctatggaacctcgtc
aaggaagtgttcttcccttcagcctacgaggacgtgccgcttattcgtggcatctatatg
gtgtcgtcggagcagggtaagcaacccttcgataaagtttctcagttggttgatggccag
tttagcctgaaaacggtcaagccagccgtgactcctgcacttgcccaggatggttttttt
ctgcgccggttattcgacagaataattttcgctgaacatggtctggcaacaacagagagc
cgtaaagagcgacgattcgtctgggcgcggcggggtaccttcgctgcaatggtggtagtc
actctaggcgcaagtgctgccggatacatgagttttcagtggaacgcaggcttgctggag
gagtaccagcaggagacggcggagctgaagatagagctcagtcagcctcaactggactgg
atcaggcttgatgcccttctgaccaaggccgcaagtatgcccggggtgctggatgcgccg
ttaccggagggtggtccgcgtcagttagggctttaccagggtgatgcgctggccgaggag
gcggaaggcgcatacggtcgcctgctacagggtcgcttcgggggcatgctgaaggaaacc
ctcgagatcgaaattgggcgcaatcttggaaaccttgagtatctgtatgagacgctcaaa
acctacctcatgcttggcgacccgcagtatctcgacagagatcaggtgcacgcctggctc
ggattcattctttcccgacagcttgccggccagataaatacagagactcgtgagtcgctg
cttcagcattcgcgacactacctggacaccgaagcgcctatgccaactgacgcggggctg
atagcccgggcccgtcaggaactgaccgccttgccgctggccgagcgcgcgtaccagcgg
atcaaggttgacgcgtcgcagtcacgtttgccggactttcggttacccatggtcatgggc
tcggtggccgaattggtgttcgagcggcgctccggcgctagcctaagggagggtgtgccc
gggctgtatacgttaaacggttatagagcactgtttgaaccggaaaagaacaaactcgtc
ggccgcctgctggaggactcctgggtctatggcgaaggtgccaaggatttcggaaccctt
gatgagaacgaaatcatggccggagtggaggagcgttacttccgcgactacgtccactac
tggcagggttttttgaaagacttgcgtgtcaagcccttcagcgatcaacgcgggggtatg
cgggtagcgcagctcctggctggcccggaagcgccgcttgcccgtctgcacgcagcagtc
aagcacaacaccacgttaacccgagagagccccgagagcgtcgcccttcaggcagctgca
ggtgttgcaaaaaaccgcgcaacgcagcgtcagcaagaactgggtaacctgatgggcatg
atgtctggtgaagaggcgcccgagcccacgttcgtagaccagactttcgacgggataaac
gaactggattcaggcgccctggaagacattcaggcccatgcagggctaatagcccggtat
cttgaagagcagagcgctggcaggccagatgccctgacgacagtgacgcgatctcagttc
gatgaggctataaagggcgttttcagcacggccaatcaaaccgatccggattttctgccc
tcgcttctcggcggctttgtgaatgactccagacgacttgtcaaggtatcggtaacgcgc
aaactcaacgatatctggcgttcaacggtctacgcagactataagaaagctatcgcgggg
cattatcccttcgttgctgaatcggactctgaagtagctctgatggatttcgccaacttc
ttcggctatggcggggtgctcgacagattttttgaagatcatctgcagggccacgtggac
accgatcgatccccctggcgtcttaccagcgacgtcggcataaatcagagcagtctgcgc
ctttttgaaagtgcagtgcgtatccgcgaggcattttttgcgcccgggagccgtcagccg
agcgtatcgttcacgttgacgcctgtttacctggacagtcgagtggctcaggtactgctg
gagatggacgggcaggtgctggtctaccgtcatgggccacctcgccccgttgtattcacc
tggccgaaaggctcaggttcgggtaccacccggcttgctgtcaccccggttgacgacaca
ggtcggtcggttcagacaacgtatcagggggcctggtctttgttccgtatgttacgcgat
acgggcggtatggccggcggcgcccggcaacagaatatcgaaattgccctggataagtac
ctcgccaacctcgaactggtcactgagtcggtcaaacacccctttaacaccgccatgctg
gaaagtttccggctaccgcccacgctctaa

DBGET integrated database retrieval system