KEGG   Hydrocarboniclastica marina: soil367_01485
Entry
soil367_01485     CDS       T06192                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
hmi  Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hmi02044]
    soil367_01485 (tssC)
Secretion system [BR:hmi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   soil367_01485 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QCF24732
UniProt: A0A4P7XF60
LinkDB
Position
319980..321476
AA seq 498 aa
MSTDNQAAEVLAVEEAPSLSLLEQAIGATKQTESDRAKELIRTLAEEAMKGTVTWNKNLT
VTFTQAISALDQMISGQLSEILHQEEFQKLEGSWRGMHHLVMNSETSATLKIRMLNLSKK
DLHKDLSKAVEFDQSQIFKKIYESEFGTPGGEPYGVMIGDYEFNNHPSDVETLGLMSNVA
AAGFCPFVSAGGSGLFGFDDWTELSKPRDLEKVFESLEYTKWRSFRESEDARFVTLTMPR
VLARLPYGQATKPVEEFGFEEFEVDPATGMSVNTDHDNYCWMNASYVLGTRMTQAFAKYG
FCTAIRGAEGGGKVEGLPTHVFRSDDGDPDLKCPTEIGITDRREAELSKLGFLPLSHYKN
TDYAVFFGAQSCQRPKQYDNPDATANAAISARLPYMMATSRFAHYLKVMARDKIGSFMEA
DDVENWLNRWILSYVNASEGGGQEIRAKFPLADAKVQVREVPGRPGSYNAIAWLRPWLQM
EELTTSLRLVAKIPEIGN
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgagtaccgacaatcaggctgcggaagttcttgctgtagaagaagcgccatcactgagt
ctgctggagcaggctatcggtgccaccaagcaaacggaaagtgacagagcgaaggagttg
attcgcacactggccgaagaagcgatgaaaggcacagttacctggaacaagaacctcacg
gtgacgttcacccaggcaatttcggctctggatcagatgatatccggtcagctctccgaa
atactgcaccaggaagagtttcaaaagctcgaaggctcctggcgcggtatgcaccaccta
gtgatgaactcagaaacgagtgcgacgctaaagatccgtatgctcaacctgagcaaaaag
gatctgcacaaggatctgtcgaaagctgttgagttcgaccagagtcagattttcaagaag
atttatgagtccgagtttggcacgcccggtggcgagccctacggcgtcatgattggcgat
tacgaattcaacaaccacccgtcagatgtggaaactctgggcctgatgtccaatgttgcg
gcggccggtttctgccccttcgtgtccgcaggcggctctgggctgttcgggttcgacgat
tggaccgaactgtccaaaccgcgcgaccttgagaaggtttttgaatctcttgagtacacc
aagtggcggtccttccgtgaaagtgaagatgcgcgcttcgtaaccctgaccatgccaagg
gtgctggcacgcttgccctacggacaggccaccaaaccggttgaagagttcggcttcgag
gagttcgaggttgacccggctaccggtatgtctgtcaacacggatcacgataactattgc
tggatgaacgcgtcctatgtgctcggtacgcgcatgacccaggctttcgccaaatacggg
ttctgtacggctatccgcggtgccgaaggtggcggcaaggtcgagggattacctacccat
gttttccggagtgatgatggcgatccggatctcaagtgtcccaccgaaatcggtatcacc
gatcggcgcgaagctgaactgagcaaactcggttttctaccgctttcccactacaagaac
acggactatgcagtgttcttcggcgcccagagctgccagcggcccaagcagtacgataac
ccggacgctactgccaacgcagctatctcggcgcgcctgccctacatgatggcaacttcc
cgcttcgctcattacctgaaggtgatggctcgcgacaagatcggttcattcatggaggct
gatgacgtcgaaaactggctgaaccgctggattctaagctacgtcaacgcatcggaaggc
ggcgggcaggaaatccgcgccaaattcccgctggcggatgcgaaggttcaggtgcgcgaa
gtaccgggccggcctgggtcctacaacgctatagcctggctacgtccgtggttgcagatg
gaagagctgaccacatctctgcgccttgtcgccaagatcccggaaatcgggaactga

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