KEGG   Hydrocarboniclastica marina: soil367_01515
Entry
soil367_01515     CDS       T06192                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    soil367_01515 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hmi02044]
    soil367_01515 (clpV)
Secretion system [BR:hmi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   soil367_01515 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat Clp_N nSTAND3 AAA_7 TniB ATPase_2 AAA_14 AAA_30 Zeta_toxin AAA_18 NACHT IstB_IS21 TIP49 ResIII ABC_tran NBD_SMAX1 SRP54 DUF815 RuvB_N Hpr_kinase_C T2SSE SLFN-g3_helicase
Other DBs
NCBI-ProteinID: QCF24738
UniProt: A0A4P7XCZ8
LinkDB
Position
327216..329810
AA seq 864 aa
MSAMTLKSLVEKMNDSGRQALERGVGLCFQRSHHSVEVEHFLKALMDEQDADLRALFLRY
GISEQKLETELDTAMEAFKTGNGATPSLSPRLVDLLRQCWLDTSIEFGESHMRGATLLFS
LLNDPAMAALTTRFAKELEHLDPQRLLSDWAEIRETLGTKAAARTPSPARKEKCLSQFTV
DLTAQARESRLDPVLGRDDEIRQVIDILTRRRQNNPILTGEAGVGKTAVVEGLAQRIADG
NVPEVLRNARLLTLDLALLQAGAGVKGEFENRLKGVIEEVRDSVVPVILFIDEAHNMVGA
GGQAGQNDAANLLKPALARGELRTIAATTWAEYKKFFEKDAALTRRFQVVKVDEPDEETA
VRILRGLVPTLETHHKVVITDAAAQAAVRLSMRYLAGRQLPDKAVALLDTAAARVAMSQG
SLPAALERVRAAQAALQAEADSLSRESRSGVDHGARQDAVATELHVLGDEITALETAWSE
EKHLVETAQELNRKVVEAEGEAANALQQELSDIRMRLLGRTEPMVHWQVTEQLVSEVLSD
WTGIPMGRMQSDEIAGILGLHDQLKKRVKGQDHALEDIARTVRIARAELADEKKPLGVFL
LVGPSGVGKTETALALAEQVYGSEANITVINMSEFKEEHKVSQLVGSPPGYVGYGEGGVL
TEAVRRKPYSVILLDEMEKAHPGVQDIFYQVFDKGMLRDGEGQDVDFKNTLILMTSNAAA
ETISDLYLDELTAPEPGALKEAIWDDLLKLFKPAFLGRTTVLPYRPLGKAELAEICQLQL
GRIGQRCLRHHNVDLEYAGDVIPAVVERCTEASSGARNIQQILQREVLPAMSQQVLECLA
DEENIKRIRLSLADDLLTVNVDRA
NT seq 2595 nt   +upstreamnt  +downstreamnt
atgtcagcaatgacgttaaaatcgctcgttgagaaaatgaatgacagcggtcggcaggcc
ttggaacgtggcgttggcttgtgcttccagcgcagccatcacagcgttgaggtagagcat
tttctcaaagcgttgatggacgagcaggatgccgacctgagggcgttgtttctgcgctac
ggcatcagcgagcagaaactggaaaccgagctcgataccgcaatggaggcattcaagacc
gggaatggtgcaacgccgagcctgtctccgcgactggtggacttgctgcgacagtgctgg
ctggatacatccatcgagtttggcgagtcgcacatgcgtggcgcgaccctcctgttcagc
ctgctcaatgacccggctatggcagcgttaacgacccgttttgccaaggagctcgagcac
ctggatccgcagcggctgttgtcggactgggcggaaatccgcgaaacgctaggcactaaa
gcggctgcgcgcacgccgtctccggcgagaaaagaaaagtgcctgtcccagttcactgtc
gacctcacagctcaggcccgtgaaagccgcctggacccagtgctggggcgcgatgatgaa
atacgccaggtcatcgatattcttactcgccggcggcagaacaaccccatcctaacgggt
gaagccggcgttgggaaaacggcagtcgtcgagggcctggcccagagaattgctgacggg
aacgtgccggaagtcctgcgtaacgcccgcttgctgaccctcgatctcgcgttgctccag
gccggcgcgggcgtgaagggcgagttcgagaaccgtctcaagggcgtgatcgaggaagtc
cgtgattctgttgtcccggtcatcctgttcatcgatgaagcccataacatggtcggagca
ggcggccaggctggccagaacgatgccgccaacctgctcaaacccgcattggcgcggggt
gagttgcgcaccatcgctgccaccacctgggctgaatacaagaagttcttcgagaaagac
gccgcactgacccgccggttccaggttgtcaaagtggatgagcctgacgaagagaccgcc
gtacgaattcttcgagggctggtgccaactttagagactcaccataaagtggtcatcacc
gatgccgcggcccaggcagcggtgaggctctccatgcgttatctggccggacgccagctt
cccgacaaggccgtagctttactcgacactgccgctgcccgcgttgcgatgagccaggga
agtctgcccgcggcgctggaacgggtgcgagcggcgcaagccgctctccaggcagaggcc
gacagtttgtcccgggaaagccgaagcggtgttgatcacggcgctcgtcaggacgcagta
gcgaccgaactgcatgtgctcggtgatgagattacggcccttgaaaccgcttggagcgaa
gaaaagcatctggtcgaaactgcgcaggaactgaaccgcaaggtggtcgaggctgaaggc
gaggctgccaacgcgctgcagcaggaattgagcgatatccgcatgcgcctgctgggtcgt
accgagcccatggtgcattggcaggtcacggaacagctggtctccgaagtgctgtcagac
tggaccggcattcccatgggccgaatgcagtcggatgagatcgcagggattctcggctta
cacgaccagttgaaaaaacgcgtcaaggggcaggaccacgctctggaagacatcgcgcgt
accgttcgcatcgcgcgcgccgagctggcggatgagaaaaagcccttgggcgtattcctg
ctggtaggacccagcggggtcgggaaaaccgaaacggcactcgcgctggcggaacaggtg
tatggcagcgaagccaacatcaccgtcatcaacatgtccgagttcaaggaggagcacaag
gtctcccaactggtcggctctccgccgggttatgttggctatggtgaaggtggggtcctc
acagaggcggtccgccgcaagccatacagcgtcattctgctggatgaaatggaaaaagcg
catccgggtgtgcaggacattttctaccaggtgttcgacaagggaatgctgcgggatggc
gaggggcaggacgttgatttcaagaacacgttgatcctgatgacctccaatgcggctgcg
gaaacgatctctgacctatatctcgacgaactgaccgcccccgaacccggtgccctcaaa
gaagcgatctgggacgaccttctcaagctcttcaagccggcctttctcggtcgcaccacc
gttctgccttaccgcccgctcggcaaagccgaactggcagagatctgccagttgcagctt
gggcgtatcggccagcgctgtctgcgtcatcacaatgttgatctggagtacgccggcgat
gtcattcctgcagtcgtcgagcgctgcacggaggccagttcgggcgcgcgaaatattcag
cagatccttcagcgcgaggtcttgccggccatgtcccaacaggtacttgagtgcctggcg
gacgaagaaaatatcaagcgcatcaggctgtcgttggccgatgacctgttaacagtgaac
gtcgacagggcttga

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