Hydrocarboniclastica marina: soil367_01710
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Entry
soil367_01710 CDS
T06192
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03420
Nucleotide excision repair
hmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
soil367_01710
03430 Mismatch repair
soil367_01710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_01710
Enzymes [BR:
hmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
soil367_01710
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
soil367_01710
MMR (mismatch excision repair)
Other MMR factors
soil367_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
ResIII
NPHP3_N
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
QCF24775
UniProt:
A0A4P7XDU4
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All DBs
Position
complement(376880..379180)
Genome browser
AA seq
766 aa
AA seq
DB search
MPALTDEQHAIITSGYEHCLITAVAGSGKTTTLAWRIRHLLEQGHDPERMLILMFNRAAR
ADFNRKLLDITHQTGLALPEIRTYHAMGFRLYKRCIREGYLPPYQGDILRDGEIHYQVWQ
LSRALVPEELQGELRRGKKEFTETAANFIDWVKSTLSPPEVVFEELGYDDKYRYLIDLFH
SFEQWRKGSHRISYADMLYEPVLAIHQNPPLQKLVGNKMDLVMVDEYQDTNEIQHLLLRY
IAGDRARVTVVGDPDQTIYEFRGAKPEFILQRFANEFDDPTELTLSYTFRYGHRLALLAD
HLISHNLGRKDVLCHAHAGTPETRVYHESPNDEADFIVQLVQRAQAAANDTGPATEQPDS
GLPASTLGDVAVLVRVWSQSVPIELRLLARQIPYHIDANKGALFTREVEALTALLALAAG
DLDGMLQEQRRELFRAILRFPHVGLREGELNDMAQYLAGFSGGWGQLLRNADTSHLKPLP
ARKISKLGGALGELEHSTLSAAKVIAQYAQATELYEGIRSLAMTHESADERIGTVKGFQR
YLASLDVDAPRALAHLRQLKDQANRLGEHDGIHLSTIHRAKGLEWPVVVIPGLQEKYLPY
SARQSERDTDLRTHIESERRLLYVGMTRASRALYLLTPASDDPEQAPSRFLGELCLPLCE
ELGAALSGPDRPETLRLETPVTAIAKRYARREDVGLEGPSIAPAAEASPGIPPSCRPIWA
HGRLRHAVFGTGLVKAEDERSFEVAFEDGRRLNFSKKSAHLYFSPA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcactgaccgacgaacagcacgctatcattacctcgggctacgaacactgcctt
atcactgccgtggccggcagtggcaaaacgacaacgctggcatggcgtatccgccacctg
ctcgaacagggccacgaccccgagcgcatgctgatactgatgttcaaccgtgccgcgcgg
gcggacttcaatcgcaaactcctggacatcacccaccagaccgggcttgccctgcccgaa
atccgcacctaccacgccatgggtttccggctttacaagcggtgtatccgggagggctat
ctgccgccttaccaaggcgacatcctgcgtgacggcgagatccactatcaggtctggcag
ctctcacgggcgctggtcccggaagaattgcagggcgagctgcgcaggggaaagaaagag
tttacggaaacagcggcaaattttatcgactgggtcaaaagtaccctttcgccgccggaa
gtggttttcgaagagctaggctacgacgacaaataccgctacctgattgacctgtttcac
agcttcgagcagtggcgtaaaggcagccatcgcatcagctacgccgacatgctctatgag
cccgtgctggcgattcatcagaatccgcccctgcagaagctggtaggcaacaagatggat
ctcgtgatggttgacgagtaccaggacaccaacgagattcaacacctgctgttgcgctac
atcgcaggcgatcgggctcgggtaaccgtagtcggcgatccggaccagaccatctatgaa
ttccgcggtgctaaacccgagttcatccttcagcgtttcgccaacgagttcgatgacccc
accgagctgacgctgtcctacaccttccgctacggccaccgcctggccctgctggctgat
caccttatcagtcataacctgggccgtaaggatgtcctctgccatgctcatgccggcacg
ccggaaacacgtgtttaccacgagtcgcccaacgacgaggccgactttatcgtccaactg
gtgcaacgggctcaggcggcagcgaacgataccgggcccgctacagagcagccggacagc
ggtttaccggcctccactctgggtgatgtggcggtgttggtgcgggtctggagccagagc
gtaccgattgagctgcggctgctggcgcgccagattccctaccacatcgatgccaacaag
ggggcgcttttcacccgtgaggtcgaggcgcttaccgcgctgctggcgctcgctgcaggt
gatctggacggtatgcttcaggagcagcgacgggagctattccgggcgattttacggttt
ccccacgtcggcctgcgcgaaggcgagctcaacgacatggcgcagtatcttgcaggcttc
agcggcggctggggtcaactcctgcgtaacgccgacaccagccacctgaagcccctgccc
gcgcgcaaaatatccaaactgggcggggcgctcggtgagctggaacatagcactctgtca
gcagcaaaggttatcgcccagtacgcgcaggcaaccgaactttacgaaggtattcgcagc
cttgccatgacccatgaatcggctgacgagcgcatcggaacagtcaaagggttccagcgc
tatctggccagcctggatgtcgatgcgcctcgggcactggcccacctgcgccaactgaaa
gaccaggccaaccgcttgggcgagcacgacggtatccatctctcgaccattcatcgggcc
aaggggctggagtggcctgtcgttgtgattcccggcctgcaggagaaatacctgccctac
agtgcccgccaaagcgaacgcgacaccgacctgcggactcatatcgagagcgaacgccgc
ctgttatacgtgggcatgacccgcgccagccgagctctttacctgctgacgccggcgtca
gatgacccggagcaggccccaagccgcttcctgggcgaactgtgcctgccgctgtgtgaa
gagctgggcgcagcgctctctggccctgaccggcctgagacacttcggcttgaaacaccg
gttacggctatagcaaagcgctacgccagacgggaagacgttggcctggagggcccctcc
attgcccctgcagctgaagcatcgccaggcattcccccgtcatgtcgaccaatctgggcc
catggccggctgcgccatgctgtcttcggaacagggctggtgaaggccgaggatgagcgc
tccttcgaggtggcgttcgaggatggcaggagattaaacttcagcaagaaaagtgcccac
ctgtacttcagccccgcatag
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