Hydrocarboniclastica marina: soil367_01855
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Entry
soil367_01855 CDS
T06192
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03030
DNA replication
hmi03410
Base excision repair
hmi03420
Nucleotide excision repair
hmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
soil367_01855
03410 Base excision repair
soil367_01855
03420 Nucleotide excision repair
soil367_01855
03440 Homologous recombination
soil367_01855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmi03032
]
soil367_01855
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_01855
Enzymes [BR:
hmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
soil367_01855
DNA replication proteins [BR:
hmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
soil367_01855
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
soil367_01855
NER (nucleotide excision repair)
GGR (global genome repair) factors
soil367_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QCF24799
UniProt:
A0A4P7XD52
LinkDB
All DBs
Position
complement(411323..414052)
Genome browser
AA seq
909 aa
AA seq
DB search
MTQEAAPAPIVLIDGSSYLFRAYHALPPLTTSKGQPTGAIKGVISMIRRLQQDYPRSPLI
AVFDAKGRTFRHDLYADYKANRPPMPEDLGSQVEPIFAIVRAMGIPLLVEKGVEADDVIG
TLACQATANGREAIISTGDKDMAQLVSEHVTLINTMTGTCMDREGVREKFGVTPEQIIDY
LALVGDTSDNIPGVNKCGPKTAVKWLQEYGDLDNLMANASGIKGKIGEYLRAAEEQLPCS
RDLATIRTSVPLEHTLENTRMREPDPKALLELYTEYEFRAWIAELEGGDASEAETAPTVT
PINTSAADTHYEIITTQPDFDRWLDRLKSAPEFAFDTETTGLNYMTAELVGVSFAVEPGT
AAYVPVKHDYMGAPEQLDREAVLEALRPLLENPAVRKIGQNLKYDKNILANHGICLEGIA
EDTMLQSYVLDSVASRHDMDSLALRYLNRRTTTFEEIAGKGAKQLTFNAIDVNTGGHYAC
EDADITLALHRTLRPQLAQAPGLDYVYSQIDMPLVPVLARMERRGARVNPDLLRRQSQEL
AEKMANLEEAAYAEAGEAFNLGSPKQLQVLLYEKLGLPVVKKTPKGAPSTAEPVLAELAL
THALPRLILDHRSLSKLKSTYTDKLPHLINSQTGRIHTSYHQAVTATGRLSSSDPNLQNI
PIRTEEGRRIRQAFVATEGYKLVAADYSQIELRIMAHLSADEGLMKAFANGEDIHKATAA
EVFGVPLEAVSGDQRRSAKAINFGLIYGMSAWGLARTLGIGRDTAQAYVDRYFERYPGVL
EYMDRTRTLAHDQGYVETLFGRRLYLPEINNRNRNLQQAAERTAINAPMQGTAADIIKRA
MVAVEDWLLQSNADARMTMQVHDELILEVREEDLPKIVGGLEQRMCAAADLRVPLLVETG
VGENWDEAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaagccgctccggcgcccatagtacttattgacggttcctcctaccttttc
cgcgcctaccacgccctgccgccgctcaccaccagcaaaggccagccgacgggcgcgatc
aagggtgtaatcagcatgatcaggcgcctgcaacaggattacccccgctcaccattgatt
gcggtattcgatgcgaagggcaggaccttccggcacgacctttacgccgactacaaagcc
aaccgaccgccaatgcctgaagacctcggtagccaggtcgagcctatttttgcgattgtt
cgggccatgggcatcccattgctggttgagaagggcgtcgaagcggacgacgtgatcggc
acactggcctgccaggccactgcgaatggtcgtgaagccattatttcaaccggggataag
gacatggctcagttggtgagcgagcatgtcacgctgatcaacaccatgacgggcacctgt
atggaccgggaaggcgtgcgcgaaaagttcggcgtgacgccggagcagatcatcgactac
ctggcgctggtcggggacacctccgacaacattcccggcgtcaataagtgcgggccgaaa
acggcggtgaagtggctgcaggagtatggcgacctcgacaacctcatggccaatgcgtcc
gggatcaagggcaagatcggcgaatacctgcgtgccgcggaagaacaactgccctgctcc
cgcgacctggctacgatcaggaccagtgtgccgctggagcataccctcgaaaatacccgc
atgcgggaaccggaccccaaggcgctcctcgagctgtacaccgagtacgagttccgggcc
tggattgctgaactcgaaggcggggacgcaagcgaggccgagaccgccccgaccgtaacg
ccgattaacacgtctgctgccgacactcactacgagattattaccacccagccggacttc
gaccgctggctcgatcggttgaaaagcgcacctgagttcgcctttgacactgaaacgacc
ggcctcaactatatgacggccgagctggtcggcgtttcctttgccgttgagcccggcacc
gccgcctatgtgccggtgaagcacgattatatgggcgctccggagcagctcgatcgcgag
gccgtgctggaagcgctcaggccgctgctggaaaaccccgcagtgcgtaaaatcggccag
aacctgaaatacgacaagaatatcctggccaatcacggcatctgtctcgagggcattgcc
gaggacacgatgctgcagtcgtatgtgctcgattcggtggcttcgcggcatgatatggat
agcctggccctgcgctatctgaaccggcgcaccacaactttcgaagaaatcgccggcaaa
ggcgccaagcagcttactttcaatgccatcgacgtgaataccggtggccactatgcttgc
gaggacgctgatatcaccctggccctgcaccggacgctgcgtccccaactggcccaggcc
cccggactcgactacgtctacagccagatcgacatgcctctggtaccggtactggcgcgt
atggaacgccggggcgcccgggtgaaccccgacctgctccggcgccagagccaggagctg
gccgagaaaatggccaacctggaagaagcggcctatgcggaggccggcgaagcgttcaac
ctgggatcacccaagcagctccaggtcctgctatacgaaaagctcggcctgcctgttgtg
aagaaaacgcccaagggcgccccttccaccgcggagcctgtgctggcagaactggctttg
acccatgccctgccacgactgattctcgatcaccgaagcctgagcaagctgaagtccacc
tacaccgataagctgccgcacctgatcaacagccagaccggccgcattcatacctcgtac
caccaggccgtcacggctacgggacgtttgtcctcctccgaccccaacctgcagaacatt
cccatccgtaccgaagagggtcgccgtattcgtcaggccttcgttgcgacggaggggtac
aagctcgtggccgcggactactcccagattgagctgcggatcatggcgcatctctctgcg
gatgaaggactcatgaaagcctttgccaatggtgaggacatacataaggccaccgctgca
gaggttttcggtgtgccgctggaggccgtcagcggcgaccagcgccgcagcgccaaggcg
atcaacttcggcctgatctatgggatgtcggcctggggcctggcgcgtacgctgggcatc
ggtcgtgacaccgcccaggcctacgtcgaccgctacttcgagcgctatcccggcgtgctc
gagtacatggaccgcacacgcacgctggcccacgaccagggctacgtcgaaacccttttt
ggccggcgcctgtacctgccggagatcaacaaccgcaaccgcaacctgcaacaggcggcg
gaacgaacggcgatcaacgcacccatgcagggcaccgcggcggatatcatcaagcgggct
atggtggctgtcgaggactggctactgcagagtaatgccgacgcccgtatgacgatgcag
gtgcacgatgagctgattctggaagtccgggaagaagacctgcccaagatcgtcggcggg
ctggagcaacgcatgtgcgcggcagcggacctgagagtccccttgctggttgaaaccggt
gtaggcgagaactgggacgaggctcactga
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