Hydrocarboniclastica marina: soil367_02215
Help
Entry
soil367_02215 CDS
T06192
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmi03009
]
soil367_02215
Ribosome biogenesis [BR:
hmi03009
]
Prokaryotic type
ribosomal protein modification factors
soil367_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QCF24859
UniProt:
A0A4P7XDA3
LinkDB
All DBs
Position
485663..487843
Genome browser
AA seq
726 aa
AA seq
DB search
MEINVNFLDNLRLEAKFDDFSVITDQPIRYKGDGSAPSPFDYFLASSALCAAYFVRVYCL
ARDIPTHNIRLSQNNIVDPENRYNQIFKIQVELPEDLSEKDRKGILRSIDRCTVKKVVQT
GPTFDIEAVDSLDEDAQALLMTTPEGSRTFIEGKDLPLEQTIANMTGILAELGMKIEIAS
WRNIVPHVWSLHIRDAASPMCFTNGKGSTKESALCSALGEFIERLSCNFFYNDQYFGEDV
AHRAFVHYPDEKWFQPGPDDELPEGILDAHCLAIYNPEDELGGSNLIDANSGRVDRGVCA
LPFVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLPEAQVQCLSEIFERAVKKQIIEAEVV
LPDVPLSVLEKYPNILEGVQALEKQGFPILVKDASLGGKYPVACVTLMNLKTGGVFASFG
AHPSFEVALERSLTELMQGRSFEGLNDVPPPTFNSLAVTEPNNYVEHFIDSSGVVSWRFF
SSKADYAFCEWDFSGTNQEEADSLFGILRDMGKEAYMAIHEDLGAPVCRILVPGYSEVYP
VEDLVWDNTNMALDYREDILNLHRLDDDQLADLVERLEESQLDNYMKVINLIGVEFDENT
VWGQLTILELKLMIYLALQQHEEALDTVGAFMQFNDNTVERNLFYQAVNAVLEIVLDDEL
ELDDFLFNLRRMFGEETLQTVLGYVDGSVRFPGLTPTNMQLEGLDKHLRLIESYKKLHAA
RAGRMS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaacgtcaactttctcgataacctcagacttgaagcgaagtttgacgacttc
tccgtaattacggaccagccgatccgctacaagggcgatgggtccgcccccagccccttc
gattatttcctggcgtcttcggcgctgtgcgcggcctattttgtgcgggtttactgcctg
gcgcgggatattcccactcacaacatccgtctgtcccagaacaacatcgttgatccggag
aaccgctacaaccagattttcaagatccaggttgagttgccggaagacctgtccgagaaa
gaccgtaaagggattctgcgctccattgaccgctgcaccgtcaagaaggtcgtccagact
ggcccgactttcgatatcgaagccgtggacagcctggacgaagacgcccaggccctgctg
atgacgacgcccgaaggcagtcgtaccttcatcgaaggcaaggacctgccccttgagcag
accatcgccaacatgactggcatcctcgccgaactgggcatgaaaatcgagatcgcctcc
tggcgcaatattgtgccccacgtctggtcgctgcatatccgcgatgccgcgtcgcccatg
tgcttcacaaacggcaaaggctcaaccaaggaaagcgccctctgttcggccctgggtgaa
tttatcgagcggttgagctgtaacttcttctacaacgatcagtatttcggcgaagacgtc
gcccaccgcgcgttcgtccactatcccgacgaaaagtggttccagcccgggccggacgat
gaactgcccgagggcattctggatgcccactgcctggccatctacaacccggaagacgag
ctgggcggctccaacctgatcgacgccaactccggcagggtagaccggggcgtctgcgcc
ttgcccttcgtgcgccagtccgacggcgaggtggtgtactttccctcgaacctgatcgag
aacctgttcctcagcaacggcatgagcgccggcaataccctgcccgaagcccaggtacag
tgcctgtcggaaatcttcgaacgcgctgtgaagaaacagattattgaagcagaagtggtg
ttgccggatgtgcccctgtcggtcctggagaagtacccgaatattctggaaggcgtgcag
gcgctcgagaagcagggctttcccatactggtgaaggatgcgtcgctgggcgggaagtac
ccggttgcgtgcgtgacgctgatgaacctgaaaaccggcggcgtattcgcctccttcggc
gcccaccccagcttcgaggtagccctggaacgcagtctgaccgagctgatgcagggccgc
agttttgaaggcctgaacgacgtgcccccgccgacgttcaacagtctggccgtgaccgag
cccaacaactatgtggagcacttcatcgactcgtcgggcgtggtctcctggcgcttcttc
agctcaaaggcggactacgcgttctgcgagtgggacttctcggggacgaaccaggaagaa
gccgacagcctgttcggcatcctcagggacatgggtaaagaggcctacatggccattcat
gaggacctgggtgcgcccgtctgccgcatactggtgcccggctattccgaagtctacccg
gtggaggacctggtctgggataacaccaacatggccctggactaccgggaggacatcctt
aacctgcaccggctcgatgacgaccagctggccgacctggtggagcgtctggaagaaagc
cagctcgacaactacatgaaggtcatcaacctgatcggtgtcgaatttgacgaaaacacc
gtctggggccagctcaccatcctggaactgaaactgatgatctatctggcgctgcagcag
catgaggaggcgctggatacggtcggtgcgttcatgcagttcaacgacaacaccgtcgag
cgcaacctgttctaccaggcggtgaacgcggtgctggaaattgtgctggacgacgagctg
gagctggacgacttcctgttcaacctccggcgcatgtttggcgaggaaaccctgcagact
gtgctgggctatgtcgatggcagcgtaaggttcccgggcctcaccccaaccaacatgcag
ctggaaggcctcgataaacacctgcgtctgatcgaaagctacaagaaactgcacgcggca
cgggcaggcagaatgagttag
DBGET
integrated database retrieval system
