Hydrocarboniclastica marina: soil367_02925
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Entry
soil367_02925 CDS
T06192
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
soil367_02925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmi03021
]
soil367_02925
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_02925
Enzymes [BR:
hmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
soil367_02925
Transcription machinery [BR:
hmi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
soil367_02925
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
soil367_02925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QCF24975
UniProt:
A0A4P7XED6
LinkDB
All DBs
Position
628289..629293
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVNEFLTPRNIEVQEISKTHAKVTLDPLERGFGHTLGSALRRILLSSMPGAAVTEVH
IDGVLHEYSAIEGVQEDVIEILLNLKGLAVKLNNRDEAELTLSKKGEGAVTAGDIQGDHD
VEIVNPEHVICNLSQSGSIDMRLRIARGRGYEASDQRGMGEDETRAIGKLQLDATFSPVR
RVSYAVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEQEEEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgaatgaattcttgactcctcgtaacatcgaagtacaggaaatcagc
aagacccacgctaaagtaacgctggaccccctggaaaggggtttcggccacacgcttggc
agtgcgcttcgcaggattttgctgtcgtcgatgcccggggcagcagttactgaagtacat
attgacggtgtgcttcatgagtacagtgccattgaaggcgtgcaggaagatgttattgag
atacttctcaacctcaaagggttggctgttaagctcaataatcgcgatgaagcggaactg
acgctctccaagaaaggtgagggcgcggtgactgccggtgacattcagggtgaccacgat
gttgagattgtgaatcccgagcacgtcatctgtaatctgagtcaatccggttcgatcgac
atgcgtctccgcattgcccgcggtcggggttatgaagcgtctgatcaacgcggcatgggt
gaagatgaaacccgtgcgatcggcaaactccagcttgacgcgaccttcagccctgtccgc
agagtctcgtatgcggtggagagcgcgcgggtagagcagcgcactgacctcgacaagctg
gtgatcgacctcgaaaccaacggcactatcgacccggaagaagcaatccgccgggccgca
acgattcttcagcagcagttggctgtattcgttgattttgatcatgaaaaagagcccgag
cgtgtagagcaggaagaggaagttgatcctattctgcttcgcccggtcgatgatctggag
ctgacggtccgctcggcgaactgcctgaaggcggagaacatttactatatcggcgatctt
atccaacgcactgaggtcgagttgctcaagactccaaacctcgggaagaagtctctgacg
gagatcaaggacgtacttgcgtcccgcggtctctccttggggatgcgtctggaaaactgg
ccgccggcgagccttcgaggcgacgatcgagtactgggcggttaa
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