Hydrocarboniclastica marina: soil367_03520
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Entry
soil367_03520 CDS
T06192
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_03520
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
soil367_03520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
GvpD_P-loop
AAA_16
AAA_22
nSTAND_NTPase5
AAA
SLFN-g3_helicase
AAA_24
ABC_tran
AAA_5
AAA_14
NTPase_1
nSTAND3
AAA_29
Zeta_toxin
AAA_30
PAXNEB
cobW
Viral_helicase1
GvpD_bR2
AAA_18
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QCF25082
UniProt:
A0A4P7XG04
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All DBs
Position
772983..774359
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AA seq
458 aa
AA seq
DB search
MAKSKVAYVCSDCGSESAKWAGQCLSCKAWNTITEFRVGKASSAGASRREGYAGALSDVQ
QLDEIELSDSARMSTGIGEFDRVLGGGLVPGSAVLIGGHPGAGKSTLLLQALCLLAERQS
VLYVTGEESLQQVALRARRLGLPTAGVRMLSETNVERIVQIAEREKPGVLVVDSIQVMHI
ADVESAPGSVSQVRESAAFLTRYAKQTQTVLFLVGHVTKDGSLAGPKVLEHMIDCSVLLE
GTSDSRFRTLRGIKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLNRASEAAPGSVVMVVW
EGTRPLLVEVQALVDATQGGYPRRVAVGMDQNRLAMLLAVLHRHGGLHCSDQDVFVNVVG
GVKVAETSADLALLSAVVSSFRDRALPQDLIILGEVGLSGEIRPVPNGLERIQEAAKHGF
RRALVPKANAPKKAVEGMQVIPVSRLSEALDALADLSD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcaaaggtggcttatgtctgcagtgactgtggttcggaatcagccaaatgg
gccgggcagtgcctgagctgtaaggcctggaataccattaccgagtttcgtgtcggcaaa
gccagcagtgccggcgccagccgccgggaaggctacgccggcgctctgtccgatgtgcag
caactcgatgagattgagctctccgattcggcgcgaatgagcacgggcatcggcgagttc
gaccgggtcctcggcggcgggctcgtaccggggtctgccgtcttgatcggcggccacccg
ggcgccggcaaaagtacattgttactgcaggccctgtgtctgctggccgagcggcaatct
gttctctacgtgaccggcgaggagtccctgcaacaggtggctttgcgggctcgtcgcctg
ggcctgccgaccgctggcgttcgcatgctctcggaaaccaatgtcgagcggatcgtccag
attgcggaacgcgaaaaacccggcgtgctggtggtggacagtatccaggtgatgcacatt
gccgatgtggagtcggcccccggaagcgtttcccaggtgcgggaaagcgccgcgttcctc
acccgttatgcgaagcagacccaaaccgtcctgtttctggttggacatgtgaccaaagat
gggtctctggccggccccaaagtgcttgaacacatgatcgattgttccgtgctgttggaa
ggcaccagcgatagccgttttcgtacgctgcgaggtataaagaaccgttttggcgcagtc
aatgagcttggtgttttcgcaatgctcgagcagggtctgaaagaggtcaagaaccccagc
gccatattcctgaaccgggccagcgaagcggcgccgggcagcgttgtgatggtcgtatgg
gagggcactcgccccctgttggtcgaggtgcaggctctggtggacgccacccagggcggt
tatcccaggcgggttgctgttggaatggaccagaatcggttggccatgctgctggcggta
ctgcaccggcacggcggcctgcactgcagtgatcaggatgtgttcgtcaacgttgtcggc
ggggtcaaagtagccgagaccagtgcagacctggctttgctctcggccgtggtctcctcg
ttccgggaccgggcattgccccaggacctgatcatattgggcgaggtgggcctcagtggt
gaaattcggccagtgcccaatgggctggagcgcatccaggaagccgccaagcatggcttc
cgtcgggcactcgtacccaaggctaatgcgccgaagaaagctgttgagggtatgcaggtg
atcccggtgagtcgcttgagcgaagctttggacgcactggctgatctgtcagattaa
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