Hydrocarboniclastica marina: soil367_03535
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Entry
soil367_03535 CDS
T06192
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00260
Glycine, serine and threonine metabolism
hmi00460
Cyanoamino acid metabolism
hmi00630
Glyoxylate and dicarboxylate metabolism
hmi00670
One carbon pool by folate
hmi00680
Methane metabolism
hmi01100
Metabolic pathways
hmi01110
Biosynthesis of secondary metabolites
hmi01120
Microbial metabolism in diverse environments
hmi01200
Carbon metabolism
hmi01230
Biosynthesis of amino acids
hmi01240
Biosynthesis of cofactors
hmi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
soil367_03535
09102 Energy metabolism
00680 Methane metabolism
soil367_03535
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
soil367_03535
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
soil367_03535
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
soil367_03535
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
soil367_03535
Enzymes [BR:
hmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
soil367_03535
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
QCF25085
UniProt:
A0A4P7XEN5
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All DBs
Position
776938..778194
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AA seq
418 aa
AA seq
DB search
MFTRDMKIAGYDDDVWNAMEAEIQRQEDHIELIASENYTSPRVMLAQGSALTNKYAEGYP
HKRYYGGCEHVDVVEDLAIERAKQLFGADYANVQPHSGSQANAAVYMALLNPGDKVLGMS
LADGGHLTHGAKVNFSGKLYDAIQYGLDAETGLLNYDEIERLAEEHKPKMILAGFSAYSQ
KLDFARFREIADKVGAYLFVDMAHVAGLVAAGIYPNPVPFADVVTTTTHKTLRGPRGGLI
LAKANPDLEKKLNSAVFPGGQGGPLMHVIAAKAICFKEAMTDEFKSYQKQVAVNAKAMAE
IFVSRGFDVISGGTENHLFLLSLIKQDITGKDADAALGRAHITVNKNAVPNDPRSPFVTS
GLRIGTPAVTTRGFGEQECRDLAGWMCDILDNINDEGTIDRVRQQVSEVCRRLPVYAN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgcgcgacatgaaaattgcaggctacgacgacgacgtctggaatgccatggaa
gctgagattcagcgccaggaagatcacattgagctgattgcctcagaaaactacaccagc
cccagggtcatgctggcccaaggctcggccctgaccaacaaatacgccgaaggttatccg
cacaagcgctattacggcggttgcgaacatgttgacgtggtcgaggacctcgctatcgag
cgcgccaagcaactgtttggtgctgactacgccaatgtccagcctcactccggctcccag
gcaaacgcggcggtctatatggcgctgctgaacccgggcgataaagtgctggggatgagc
ctggccgatggcgggcatctgacgcacggcgccaaggtcaacttctccggcaagctgtac
gacgcgattcagtacggtctcgatgccgagaccgggctgctcaattacgatgagatcgag
cgtctggctgaagagcacaagcctaaaatgattctggcgggattctcggcctactcccag
aagctcgattttgcccgtttccgcgagatagcggacaaagtcggtgcatacctgtttgtc
gacatggcccacgtggctgggctggtcgccgctgggatctatcccaacccggtgccattt
gccgatgtcgttaccaccacgacgcataagacgctgcgtggaccccggggcggcctcatc
ctggccaaagccaacccggacctggagaagaagctcaattcagctgttttccccggcggg
cagggtggccccctgatgcatgtcatcgcggcgaaggccatttgttttaaagaggccatg
accgatgagttcaagtcataccagaagcaggtggccgtcaacgcgaaggcgatggctgaa
atcttcgtcagtcgcggctttgacgtgatctccggtgggaccgagaatcatttgttcctg
ctgagcctgatcaagcaggacatcaccggcaaagacgctgacgccgcgttgggccgggcg
catattaccgtcaacaagaacgccgtgcctaacgacccgcggtctcccttcgttacgtcg
ggtctgcgtattggcacgccggccgttaccacgcgtggctttggtgagcaggagtgccgc
gatttggccggctggatgtgtgatatcctcgacaatatcaatgacgaaggcactatcgat
cgggttcgccagcaagtcagcgaagtctgcaggcgtctgccggtctacgcgaactga
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