Hydrocarboniclastica marina: soil367_04470
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Entry
soil367_04470 CDS
T06192
Name
(GenBank) LysR family transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmi03000
]
soil367_04470
Transcription factors [BR:
hmi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
soil367_04470
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
DUF3755
Motif
Other DBs
NCBI-ProteinID:
QCF25241
UniProt:
A0A4P7XEB9
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Position
973411..974442
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AA seq
343 aa
AA seq
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MPGRCNGVSCVWWRTRTARSVAALRRDPGESRARAEQARDRWKSVEAPVDIELLKTFLEV
GRIRHFGRAAENLYLTQSAVSARIRQLEQVLGTELFNRTRNNIQLTASGERLLPHAEAAL
AAWEQGRQAVSLSADRESLLTLAAAPSLWDSRGQQALGRLRAAMPELGLRAESHPDSTLA
RRLLELQVDLILCYDPPKRYDVIIHELSPLRLILVTNQAQLNLSQALGPDYLYVDWGASF
SGKHATVFAAMPSPRVQIGSGRLALDLLLAEGGAVYLPEPVVEPYLSARRLFRVEKAPVF
ERGVHLAYRRGAENAAMLEQVVTLIAAAGWRGAESLQLPLIDK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcagatgcaatggcgtgagttgcgtctggtggcggaccaggactgcccggtct
gtcgcggcgttacggcgtgatccaggcgaatctcgagcgagggcggaacaggcccgggac
agatggaagtcagtggaggcgcccgtggatatagagttactcaagacctttcttgaagtc
ggccgcattcgccacttcggtcgggcggcggaaaatctctatcttacgcagtccgcggtc
agtgcccggatccgccagctggaacaggtgctgggtactgagctgttcaacagaacacgc
aataatatccagttgaccgcatcaggggagcgcctgttacctcatgcagaagctgcactt
gcggcatgggagcaggggcgacaggctgtgtcactgtcagccgacagggagagcctgctg
acgctggccgccgcgccttctctctgggacagccgcggtcaacaggcgctggggcggctg
cgggcggccatgccagagctcgggttgcgcgcagaaagccatccggacagcactctggcg
cggcgcctgcttgagctgcaggtggatcttattctctgctatgacccgcccaaacggtac
gatgtcattattcacgaactgtcgccgttgcgcctgattctggtaacgaatcaggcgcag
ttgaatctttcgcaggcgctcgggccggattatctctacgtcgactggggcgccagcttc
tccggcaagcacgcgaccgtgtttgcagccatgccaagccctcgggtacagattggcagc
ggtcgcctggcactggacctgttgttggctgagggcggggctgtctatctgcccgagcct
gtggtcgaaccctacctgtccgcgcgccggctttttcgggtcgaaaaagccccggtcttc
gagagaggggttcaccttgcttaccggcgcggcgcggagaacgcggccatgctggagcag
gtcgttaccctgatcgcagcggctggatggcgcggcgcggaatcgctgcaactccccctg
atcgataaataa
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