Hydrocarboniclastica marina: soil367_06195
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Entry
soil367_06195 CDS
T06192
Name
(GenBank) DUF349 domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_06195
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
soil367_06195
Archaeal homologous recombinant proteins
soil367_06195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF349
Abhydrolase_8
Motif
Other DBs
NCBI-ProteinID:
QCF25549
UniProt:
A0A4P7XF18
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All DBs
Position
complement(1385290..1387926)
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AA seq
878 aa
AA seq
DB search
MSSFFKRLFKQKSPKRNPEPQPRDIEQLDPKDPRDRDKLFKIVTDPQTSDREVIAALTKT
GTLEFIVPWYVESPPRVQNIISDWIARQPGSARRLSQARGKLADPRLKRICDQLAGDTDE
NTGGASLQDQGPEQLERLALRSKSAHERREAAERIEDESTLQRVAKASKGRDKSVYQIAR
HKLQALREQDARAEAINAQTEKLIDECALHARTESTQFYSQRFESLTERWKALSETATPH
QQERFHAAQAQCQVRLNELLAEAEKAAQATARSHERQETLALLDRTLDDLQNLAPDQIPG
ISSLDAMQKTQENRWLEATRDSPVDRSEQRKYEHLMQALRQYVQAVQNFEARRGQLEEAT
ANGDANSLVNLVAEVAWPVGYTEPQVLNAARVLTLKRTVPAEAAITGSTETKEIDGLLDK
LEDATQKKELKPSRRLLKEVQQRVDRVPGAGRRQFQGRLTLLARQVQELQDWQGFATRPK
QESLCEQMEHLTDQHLDPELKASKIQELQKEWRELGGSSDQVLWQRFKKAADLAFEPCQQ
YFEIRNELKAANLHKREQLCDELSMFVSQVDWSACDWRGVEKIHRKAREEWREAKPIDFR
RNRDIQRRFDVLLKEIDGRLNEERDRNERVKADIVERARALSELEPLNDAISQAKGLQKE
WEAVGLTDQKRDRLLWQSFRAACDKVFARRDDQRAEQQAQTSEQLEAAQALLDAIETTLV
SPELSNGAGAIRQRLQDYRKLELPPTHRDALDRRFEQLQDRFQQAAREAESAEIKRMWLQ
QLRQVPSDAPAQPDTEALREICVRAEILAGLESPEEDQQARMTLQVERLAAGLGQGDRIP
DTRTEVDRLIGSWQKNAGATPPAHLQERIEHAFTSLVF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtttttcaaaaggctgttcaagcagaagtcgccaaagcgcaatcccgagcca
caaccccgcgatatcgagcagcttgaccctaaagacccgcgggatcgggacaagctgttc
aagatcgttactgatcctcaaacaagcgatcgcgaggtcatagcggcattaacgaaaacg
ggtacccttgagtttatcgttccctggtacgtagagtcgccccctcgcgtgcagaacatt
atcagcgactggatagcacgacagccaggtagcgctcggcgtttgagccaggcccgaggc
aaacttgctgatccccgcctaaagcggatttgtgaccagttggccggggatactgacgag
aacaccggcggcgcgagtctacaagaccagggcccagaacaacttgagcgactcgcgctc
aggtccaaatctgctcacgaacgtcgcgaggctgccgaaagaattgaagatgagtcgact
ctgcaacgcgtcgccaaagcctcgaaagggcgcgataaaagcgtctatcagatcgcccgc
cataagttgcaggccttacgtgaacaagacgctcgggctgaagccattaatgcacagacc
gaaaaactaattgacgagtgcgcgctacatgcgcgaacagaatcaacacagttttatagc
cagcggtttgaaagtttgaccgagcgctggaaggccctctccgaaacggcgacaccccat
cagcaggagcgcttccatgccgctcaggcccagtgccaggtccgcttaaatgagctgttg
gcagaggctgagaaagcggcccaggcgacggcacgcagccacgaacgccaagagaccctg
gctctgttagatcgtaccctggacgacctgcagaatctggcgccggaccagatcccggga
atatcctcgctggatgccatgcagaaaacccaggagaaccgatggctggaagccacccgt
gatagcccagtggaccggagcgaacagcggaaatacgaacatctgatgcaggcattacga
caatatgtgcaggcggtccagaattttgaagcgcggcgcggacagcttgaagaggctacg
gccaacggcgacgctaacagccttgtaaatcttgtagctgaagttgcctggcctgtcggc
tacacggaacctcaggtgctcaacgctgcccgggttctcaccctcaagcgcacagtgccg
gcagaagccgctataaccggctcgacagaaacgaaagagatcgacgggctgctggacaaa
cttgaggacgcaacccagaaaaaagaactcaagccctcccggcgcttgctcaaggaggtg
cagcagcgtgtcgatcgcgtcccgggcgctggtcgccgtcagttccagggcaggctcact
ctcctcgcacgccaggtccaggagttgcaggactggcagggctttgccactcgtcccaag
caggagtcgctttgtgagcagatggagcacctgacagaccagcaccttgaccctgagctg
aaggcgtcaaagattcaggagctgcaaaaggagtggcgcgaactcgggggctcatcagac
caagtgttgtggcaacgcttcaagaaagccgctgatcttgcgttcgagccctgtcagcag
tacttcgagattcgtaacgagttgaaagccgccaaccttcataagcgagaacagctgtgt
gacgaactgagcatgttcgtctcccaggtagactggtcggcttgcgactggcgtggcgtc
gaaaagattcatcgcaaagcgcgggaagagtggcgcgaggccaaaccgatcgatttccgc
cgtaaccgcgacatccagcgccgcttcgacgttctgctcaaggagatcgatgggcggctt
aacgaggagcgggatcgcaacgaacgcgtaaaagcagatattgtagagcgcgcccgtgca
ctgtctgaacttgaacccctgaatgacgctataagccaggctaagggtctgcaaaaagaa
tgggaggctgtaggtcttactgatcagaagcgtgaccggctgctgtggcaatcttttcgc
gctgcctgcgataaggtgtttgcgcgacgggatgaccagcgcgccgagcagcaagcccag
acatcagagcagctagaggccgcgcaagcccttctggatgccattgaaacaacgcttgta
agtccagaactgtccaacggggccggcgctattcgtcaacgtttgcaggactatcgcaaa
ctggaactgccaccgacacaccgtgatgctctggatcgcagattcgaacaacttcaagac
cgtttccagcaggccgcaagggaggcggagtcggccgagatcaagcgcatgtggttgcag
caactcaggcaagtcccttcggacgcgcctgcccagccagataccgaagcattgcgcgag
atttgtgtccgcgccgagatactggccggcctggagtcacctgaggaagaccagcaggcg
aggatgaccctgcaggtggaacgccttgcagccggtctgggccagggcgaccggataccc
gacacccgcacagaagtggatcgcctgattggttcgtggcaaaaaaatgccggagctacg
ccgcctgcgcatttgcaggagcgcatcgaacatgcgtttacttcactcgtgttctga
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