KEGG   Hydrocarboniclastica marina: soil367_08200
Entry
soil367_08200     CDS       T06192                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hmi  Hydrocarboniclastica marina
Pathway
hmi00010  Glycolysis / Gluconeogenesis
hmi00020  Citrate cycle (TCA cycle)
hmi00260  Glycine, serine and threonine metabolism
hmi00280  Valine, leucine and isoleucine degradation
hmi00310  Lysine degradation
hmi00380  Tryptophan metabolism
hmi00620  Pyruvate metabolism
hmi00630  Glyoxylate and dicarboxylate metabolism
hmi00640  Propanoate metabolism
hmi00670  One carbon pool by folate
hmi00785  Lipoic acid metabolism
hmi01100  Metabolic pathways
hmi01110  Biosynthesis of secondary metabolites
hmi01120  Microbial metabolism in diverse environments
hmi01200  Carbon metabolism
hmi01210  2-Oxocarboxylic acid metabolism
hmi01240  Biosynthesis of cofactors
Module
hmi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hmi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hmi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:hmi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    soil367_08200 (lpdA)
   00020 Citrate cycle (TCA cycle)
    soil367_08200 (lpdA)
   00620 Pyruvate metabolism
    soil367_08200 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    soil367_08200 (lpdA)
   00640 Propanoate metabolism
    soil367_08200 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    soil367_08200 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    soil367_08200 (lpdA)
   00310 Lysine degradation
    soil367_08200 (lpdA)
   00380 Tryptophan metabolism
    soil367_08200 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    soil367_08200 (lpdA)
   00670 One carbon pool by folate
    soil367_08200 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hmi04147]
    soil367_08200 (lpdA)
Enzymes [BR:hmi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     soil367_08200 (lpdA)
Exosome [BR:hmi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   soil367_08200 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 DAO HI0933_like AlaDh_PNT_C FAD_oxidored Lys_Orn_oxgnase GIDA NAD_binding_8 3HCDH_N Thi4 UDPG_MGDP_dh_N Amino_oxidase Lycopene_cycl 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: QCF25900
UniProt: A0A4V1D8P4
LinkDB
Position
1816942..1818384
AA seq 480 aa
MADKFDVIVIGAGPGGYVAAIRAAQLGLKTACVENWKDKEGNPTFGGTCLNVGCIPSKAL
LEISHKYVEAKHGFADQGLVVGDLSVDVPKMMERKSTIVKNLTGGIGQLFKANGVTPIIG
RGRLLGGKQVEVTDSEGKTQTYSAENVILATGSRPIEIPPARTDGDKIVDSEGALEFTEV
PKRVGVIGAGIIGLELGSVWARLGAEVTVLEAQETLLPMVDQQLAKEAMKTFTKQGLDIK
LKCRVTGTEIKRGVVKVTYEDTKGTQELKCDKLIVAVGRTPNTENLLEGDTGVNIDERGF
VHVDDYCQTDAPGVYAVGDMVRGPMLAHKGSEEGIMVADRIAGHKAEVNYDAIPNVIYTH
PELAWVGQTEEQLKAAGETYKVGAFPFAANGRAMAAHAAEGQVKIIADEKTDRILGMHII
GPQASEMIAQGVIAMEFGSSAEDLALTCFAHPTLSETVHEAALAVDGMAVHKANRKRKKK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggctgataaatttgacgtgatcgtcatcggtgcaggccccggaggctacgtcgccgca
attcgtgccgcgcaattgggtttgaaaacggcctgtgtggagaattggaaggacaaggaa
ggtaacccgacttttggcggaacctgcctgaatgtcggttgtattccgtccaaggcgcta
ctcgagatatcccacaaatacgtcgaggccaagcatggcttcgccgaccagggtcttgtg
gtgggcgacctcagcgtggacgttccgaaaatgatggagcgcaagagtaccatcgtcaag
aaccttaccggcggtattggccagttgttcaaggccaatggtgtgacgccaatcatcggc
cgcggtcgcctgttgggcggcaagcaggtcgaggtcaccgacagcgaaggaaaaacgcag
acctattccgcagaaaacgtgattctggccacgggttcccggcccattgagattccgcca
gcccgcaccgatggagacaagatcgtcgatagcgagggcgctttggaattcaccgaagtg
cccaagcgggtaggtgtcattggcgccggtatcatcgggctggaactgggcagtgtatgg
gcccgcctgggcgcagaagtgactgtgctggaagcccaggagaccctgctgccgatggtc
gatcagcagctcgcgaaagaagcgatgaagacgttcaccaagcagggacttgatatcaaa
ctgaagtgtcgggtgaccggtactgagatcaagcgcggcgtagtcaaggtcacctacgaa
gataccaaggggacacaggagctcaagtgcgacaagcttattgtcgcggtgggacgcacg
ccaaacacggagaatctcctcgagggcgacaccggcgtcaatatcgacgagcgcggattc
gtgcacgtggatgactattgtcagaccgacgcgcctggcgtctatgcggtcggtgatatg
gtgcgcggcccgatgctcgcccacaagggttcagaagaaggcattatggttgccgatcgc
atcgccggccataaagctgaggtcaactacgacgccatacccaatgttatctacacccat
ccggaactggcctgggtggggcagaccgaggagcaactcaaggccgcgggtgagacctat
aaagtcggagcttttccgtttgcggcaaatggccgggcaatggctgcacatgctgccgaa
ggccaggtcaagattatcgcagacgagaaaacggatcgtattctcgggatgcatatcatc
ggtccccaggcctcggaaatgatcgctcagggtgtgatcgccatggagttcggttccagt
gcagaagacctggcgctgacctgtttcgctcacccgacgttgtcggaaactgtgcatgaa
gcagccttggcggtcgacggcatggcggttcacaaagcgaaccgtaagcggaagaagaag
taa

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