Hydrocarboniclastica marina: soil367_08200
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Entry
soil367_08200 CDS
T06192
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00010
Glycolysis / Gluconeogenesis
hmi00020
Citrate cycle (TCA cycle)
hmi00260
Glycine, serine and threonine metabolism
hmi00280
Valine, leucine and isoleucine degradation
hmi00310
Lysine degradation
hmi00380
Tryptophan metabolism
hmi00620
Pyruvate metabolism
hmi00630
Glyoxylate and dicarboxylate metabolism
hmi00640
Propanoate metabolism
hmi00670
One carbon pool by folate
hmi00785
Lipoic acid metabolism
hmi01100
Metabolic pathways
hmi01110
Biosynthesis of secondary metabolites
hmi01120
Microbial metabolism in diverse environments
hmi01200
Carbon metabolism
hmi01210
2-Oxocarboxylic acid metabolism
hmi01240
Biosynthesis of cofactors
Module
hmi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hmi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hmi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
soil367_08200 (lpdA)
00020 Citrate cycle (TCA cycle)
soil367_08200 (lpdA)
00620 Pyruvate metabolism
soil367_08200 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
soil367_08200 (lpdA)
00640 Propanoate metabolism
soil367_08200 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
soil367_08200 (lpdA)
00280 Valine, leucine and isoleucine degradation
soil367_08200 (lpdA)
00310 Lysine degradation
soil367_08200 (lpdA)
00380 Tryptophan metabolism
soil367_08200 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
soil367_08200 (lpdA)
00670 One carbon pool by folate
soil367_08200 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmi04147
]
soil367_08200 (lpdA)
Enzymes [BR:
hmi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
soil367_08200 (lpdA)
Exosome [BR:
hmi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
soil367_08200 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_binding_3
DAO
HI0933_like
AlaDh_PNT_C
FAD_oxidored
Lys_Orn_oxgnase
GIDA
NAD_binding_8
3HCDH_N
Thi4
UDPG_MGDP_dh_N
Amino_oxidase
Lycopene_cycl
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QCF25900
UniProt:
A0A4V1D8P4
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All DBs
Position
1816942..1818384
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AA seq
480 aa
AA seq
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MADKFDVIVIGAGPGGYVAAIRAAQLGLKTACVENWKDKEGNPTFGGTCLNVGCIPSKAL
LEISHKYVEAKHGFADQGLVVGDLSVDVPKMMERKSTIVKNLTGGIGQLFKANGVTPIIG
RGRLLGGKQVEVTDSEGKTQTYSAENVILATGSRPIEIPPARTDGDKIVDSEGALEFTEV
PKRVGVIGAGIIGLELGSVWARLGAEVTVLEAQETLLPMVDQQLAKEAMKTFTKQGLDIK
LKCRVTGTEIKRGVVKVTYEDTKGTQELKCDKLIVAVGRTPNTENLLEGDTGVNIDERGF
VHVDDYCQTDAPGVYAVGDMVRGPMLAHKGSEEGIMVADRIAGHKAEVNYDAIPNVIYTH
PELAWVGQTEEQLKAAGETYKVGAFPFAANGRAMAAHAAEGQVKIIADEKTDRILGMHII
GPQASEMIAQGVIAMEFGSSAEDLALTCFAHPTLSETVHEAALAVDGMAVHKANRKRKKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaatttgacgtgatcgtcatcggtgcaggccccggaggctacgtcgccgca
attcgtgccgcgcaattgggtttgaaaacggcctgtgtggagaattggaaggacaaggaa
ggtaacccgacttttggcggaacctgcctgaatgtcggttgtattccgtccaaggcgcta
ctcgagatatcccacaaatacgtcgaggccaagcatggcttcgccgaccagggtcttgtg
gtgggcgacctcagcgtggacgttccgaaaatgatggagcgcaagagtaccatcgtcaag
aaccttaccggcggtattggccagttgttcaaggccaatggtgtgacgccaatcatcggc
cgcggtcgcctgttgggcggcaagcaggtcgaggtcaccgacagcgaaggaaaaacgcag
acctattccgcagaaaacgtgattctggccacgggttcccggcccattgagattccgcca
gcccgcaccgatggagacaagatcgtcgatagcgagggcgctttggaattcaccgaagtg
cccaagcgggtaggtgtcattggcgccggtatcatcgggctggaactgggcagtgtatgg
gcccgcctgggcgcagaagtgactgtgctggaagcccaggagaccctgctgccgatggtc
gatcagcagctcgcgaaagaagcgatgaagacgttcaccaagcagggacttgatatcaaa
ctgaagtgtcgggtgaccggtactgagatcaagcgcggcgtagtcaaggtcacctacgaa
gataccaaggggacacaggagctcaagtgcgacaagcttattgtcgcggtgggacgcacg
ccaaacacggagaatctcctcgagggcgacaccggcgtcaatatcgacgagcgcggattc
gtgcacgtggatgactattgtcagaccgacgcgcctggcgtctatgcggtcggtgatatg
gtgcgcggcccgatgctcgcccacaagggttcagaagaaggcattatggttgccgatcgc
atcgccggccataaagctgaggtcaactacgacgccatacccaatgttatctacacccat
ccggaactggcctgggtggggcagaccgaggagcaactcaaggccgcgggtgagacctat
aaagtcggagcttttccgtttgcggcaaatggccgggcaatggctgcacatgctgccgaa
ggccaggtcaagattatcgcagacgagaaaacggatcgtattctcgggatgcatatcatc
ggtccccaggcctcggaaatgatcgctcagggtgtgatcgccatggagttcggttccagt
gcagaagacctggcgctgacctgtttcgctcacccgacgttgtcggaaactgtgcatgaa
gcagccttggcggtcgacggcatggcggttcacaaagcgaaccgtaagcggaagaagaag
taa
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