Hydrocarboniclastica marina: soil367_08230
Help
Entry
soil367_08230 CDS
T06192
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmi03009
]
soil367_08230
Enzymes [BR:
hmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
soil367_08230
Ribosome biogenesis [BR:
hmi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
soil367_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QCF25906
UniProt:
A0A4P7XG38
LinkDB
All DBs
Position
1823575..1824612
Genome browser
AA seq
345 aa
AA seq
DB search
MSRQGKPVSRAPRSTPQNPAQASQSQRQPPERLQKVLARAGLGSRRELEALIEAGRIAIN
GVAADLGAKLAPGDTVEIDGKPVSLDGIFESERRVLIYNKPEGEVTTRQDPEGRPTVFDR
LPKLKSQRWISVGRLDINTTGLLLFTTDGELANRLMHPSHQVDREYAVRVFGEVDEAMQQ
RLVEGVLLDDGMAAFSDLAPAGGSGLNRWFHVTLLEGRNREVRRLWESQGVKVSRLKRVR
FGPILLPSRVSLGRWEELDQKTVDGLSAQVGLEPKALPVKAPDEKARFERQKSKAAPAAK
ARASARRKKPDERDSDDAPRRVSRDQLATKAPRKRRAPKPSRRQS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacaaggcaagccggttagccgggcgcccagatcaaccccacaaaaccccgcc
caggcgagccaaagccaaaggcagccgccggaacgtctccagaaagtactggccagagcc
gggctcggttcccgccgtgagctggaggccctgattgaggcgggtcgaatcgctatcaat
ggtgtagccgcggatcttggcgcgaagctggcgccgggcgacaccgtcgaaatcgacgga
aagcccgtcagcctggacggtattttcgaatccgagcgacgcgtgcttatctataacaag
cccgagggggaggttacaacgcgtcaggatcccgagggccggccaactgttttcgaccga
ctgcccaagctcaagagccagcgatggatttcggtgggccggctggatatcaacacgaca
ggtttgctgctttttaccacggacggcgaactggccaaccggctcatgcatccgtcgcat
caggttgaccgggagtacgctgtgcgtgttttcggcgaagttgacgaagcgatgcagcag
cggctggtcgaaggtgtcctacttgatgacggtatggcggctttttcggatctggcgcca
gcgggaggttcagggctcaaccgctggtttcacgttacattgctggaagggcgcaaccga
gaggttcgccggctctgggaatcccagggggtgaaggtcagccggctgaaacgcgttcga
ttcggcccgatactgctgccgagccgggtatcgctgggccgctgggaggagcttgaccag
aaaacggtcgacgggctcagtgcccaggtaggtctggagcccaaggcgctgccggtcaaa
gcgccggacgagaaagcccgattcgaacggcagaagagtaaagccgcgccagcggcaaaa
gcccgcgctagcgcacggcgcaagaaaccggatgagcgggattcagatgatgcgccgcgg
cgggtcagccgggaccagcttgcgactaaagcaccacgtaaacgacgcgctcccaaaccc
agccgccgacagtcctga
DBGET
integrated database retrieval system
