Hydrocarboniclastica marina: soil367_08270
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Entry
soil367_08270 CDS
T06192
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmi03016
]
soil367_08270
Enzymes [BR:
hmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
soil367_08270
Transfer RNA biogenesis [BR:
hmi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
soil367_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_8
Pyr_redox
FAD_binding_2
FAD_binding_3
Lycopene_cycl
NAD_binding_9
ApbA
HI0933_like
Pyr_redox_3
TrkA_N
GIDA
Motif
Other DBs
NCBI-ProteinID:
QCF25914
UniProt:
A0A4P7XHI5
LinkDB
All DBs
Position
complement(1837580..1839604)
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AA seq
674 aa
AA seq
DB search
MTSSVEKDSVLLETAVLGWSDACEPTSEMFSDRYFSSSGGLSESRYVFLEQNDLEQRFRN
LGVRNCFTIAETGFGTGLNFLATAQVWQRQRSSAWLHFVSFERYPLAQPDLERAHARWPE
LADLAELLQAQYPEAVRGLHRLVWPELRIRLTLWFGDAAEGLDAFPFIADAWFLDGFNPS
SNPALWNDDLYRAVANHSAEGSTLSTFTVAGAVRRGLGAVGFDVVKVPGHKPKREMTRAT
FRETPRTGSTHAGVPRRVVIVGAGISGCLLAANLADRGSDVTIVEAGPGPANAASGNPQG
ALYVKLAVDYTPQSQLALMALLFAQRFYDSAQARMNGIRFWHPTGLLQLATDATELDRQA
RFLQRNRYPQKFMQAVSARTASELAGLATDHGGLYFPRSGWLSPPALCQALCDHPNIRLF
TNMSMREFGAEPGAHWVDLEPTSDSAADSAQATDARRTRLTADQLILCTGASPVLKRLGL
PIKPIRGQVSWWPVGVLPSPDCVVCGDGYINPSDTTQQTLGATFDLHDDFPGVRGEDHQR
NLSSVAAWLPDLQRLDNAAAYLAQGRTSFRCTTPDYQPIAGVLNEDRGRPGEQNCDSASG
GYHEAERKVEAEREVAVLAGLGSKGLALAPLLAEWLSDHLCGEPPALPQALKEKVLPSRF
RDRQARRMAPRNGQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcgttgagaaagattcggtccttctggagaccgcggtgctgggctggagc
gacgcttgtgaaccaacctccgagatgttttccgaccggtacttcagcagtagcggtggg
ctgtccgaatcccgttacgtgtttctggagcagaatgacctggagcagcggttccgcaat
ttgggcgtgcgcaactgcttcactattgccgagaccggtttcggtaccgggctgaacttt
ctggcgacggcccaagtctggcagcgacagcgttcaagcgcatggctgcacttcgtgtca
ttcgagcgatacccgctggcccagcctgacctggagcgagcgcacgcccgctggccagaa
ttggctgaccttgctgaactgctccaggcgcagtatcccgaagctgttcgggggctgcac
cggctggtctggccagagttgcgcattcgtctgacgctctggttcggtgatgcagctgag
ggccttgatgcttttccgttcattgcggatgcctggtttctcgatgggttcaatcccagc
agtaatcccgcactatggaatgacgacctttaccgcgcggtggctaaccacagtgccgag
gggagcactttgtcgacctttaccgttgccggcgctgtccggcgcgggctgggggcggtc
gggtttgatgtggtgaaagtgcccggccacaagcccaaacgggaaatgacccgcgccacg
ttccgggaaacgccccggactggcagcacccacgccggcgtgccccggcgtgtggttata
gttggtgccgggatttccggctgcctgcttgccgcaaaccttgccgacaggggctcggac
gtcactattgtcgaagcgggccctggcccggcgaacgcggcatcaggcaaccctcagggc
gccctctacgtaaagctggcggtggactatacgccgcagagccagcttgccctgatggca
ctcctgttcgcgcaaagattctatgactcagcccaggctcgcatgaacgggatacgtttc
tggcatccgaccgggctgctgcaactggcgacggacgcgactgaactggaccgccaggcg
cgtttcctccaacgcaatagatacccgcaaaagtttatgcaagccgtgtcggcgcgtacg
gcgtcagaacttgcggggctggctacagatcatggggggctttattttccccgcagtggc
tggctatcacctcctgcgctgtgccaggcattgtgtgatcatccgaatattcgtctgttt
accaacatgagcatgcgcgagttcggcgcggaacccggcgctcattgggtcgaccttgaa
ccgacctctgactcagcggctgactcggctcaggccacggacgcacgccgaactcgactg
acagcggaccaacttatcctctgcacaggcgcgtccccggtgctaaagcggctcggtctg
ccgatcaagcccatacggggccaggtcagttggtggcctgtcggggtgctaccgtctccg
gactgtgtggtatgcggtgatggctacatcaacccgtccgacaccactcaacagaccctg
ggcgcgacgtttgacctccatgatgattttccaggcgtgcgcggtgaggatcatcagcgc
aacttatcatcagttgcagcatggttaccggatttacagcgcctcgacaacgcagcggct
tatctggcgcagggccgaacatcgttccgttgcaccacgcccgactaccagcccatcgcg
ggagttctgaacgaagaccggggaagacccggcgaacagaattgtgacagtgcctccggc
ggctaccatgaagctgaacgtaaagtggaagctgaacgtgaagtggctgtcctggcaggg
cttggcagcaagggccttgcattggcgccattgctcgcggagtggctcagcgaccacctt
tgcggtgaacctccggcactgccccaggccctgaaggaaaaggttcttcccagccgtttc
agggatcgccaggccaggcgcatggccccgcgtaacgggcaatga
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