Hydrocarboniclastica marina: soil367_08715
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Entry
soil367_08715 CDS
T06192
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
soil367_08715 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmi03019
]
soil367_08715 (recQ)
03400 DNA repair and recombination proteins [BR:
hmi03400
]
soil367_08715 (recQ)
Enzymes [BR:
hmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
soil367_08715 (recQ)
Messenger RNA biogenesis [BR:
hmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
soil367_08715 (recQ)
DNA repair and recombination proteins [BR:
hmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
soil367_08715 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCF25996
UniProt:
A0A4P7XGB2
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All DBs
Position
complement(1933164..1935071)
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AA seq
635 aa
AA seq
DB search
MTSSIPPSPERPFQDQPFHDEASPGARPLTPAPQVRSPQRILEETFGYKTFRGSQKEIID
EVMAGRDALVLMPTGGGKSLCYQVPAMARPGVGIIVSPLIALMQDQVDALCQLGVRAALL
NSTLEAPEAWSTEQALLSGELDLLYVAPERLIQPRMLDLLARAPLALFAIDEAHCVSQWG
HDFRSDYLQLNLLHERFPHVPRIALTATADERTRREIAVRLELEQARHFVAGFDRPNIQY
RITPKTQVRQQLLSFLRAEHMGDAGIVYCLSRKKVEQTADWLTTQGLTALPYHAGLSAEM
RALHQRRFLREEGIIIVATIAFGMGIDKPDVRFVAHLDLPKSVEAYYQETGRAGRDGLPA
TAWMAYGLQDVITLRQMLEGSPGHEDFKRVERARLEAMLGLCEMVSCRRQALLRYFGETG
TPPCGNCDTCLTPVKTRDATTEVQKALSCVYRTGQRFGVNHLIDVLRGSQGEKIKQFGHD
QVSTFGIGAETSAQQWRAIFRQLVAKGLLEVDLEGFGGLRLTEACRPILKGEQHIELAED
APAKASRSSRGSSSKKEILDLSPAEMMQWEALRACRKRLADEQGVPPYVIFHDATLLEIL
RGAPQTLDDLQTINGVGERKLEKYGADFLEVTRGG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatcgataccgccctcgccagagaggccttttcaggaccagccttttcacgac
gaggcttcgccaggcgcgcggccgttaacgcctgcgccgcaagtacggtcaccccaacgt
attctcgaagagaccttcggctacaagacgttcaggggctcccagaaagagataattgat
gaagtcatggctggtcgcgatgccctggtgctgatgccgaccgggggcggcaagtcgctg
tgctaccaggtgccagccatggcgcggccgggggttggcatcatcgtctcgccgttgatt
gctttgatgcaggaccaggtcgatgcgctctgtcagttaggtgtcagagccgcgcttctt
aactccacccttgaagctccggaggcgtggagcactgaacaggcgctattgagtggtgaa
ctggacctgctctatgtcgccccggaacgcctgattcagccgcgcatgcttgatctgctg
gcccgcgcgcccctggctctgtttgcgatcgacgaagcccattgcgtctcccagtggggg
catgattttcgctccgactacctacagctaaacctcctgcatgagcgttttcctcacgta
ccgcgaattgcattgacggctaccgctgatgaacggacccggcgggaaatagcagtgcgg
ctcgaactggaacaggcccgccatttcgtggccggcttcgaccgacccaacatccagtac
cgcataaccccgaaaacccaggtgcggcagcaactgctgagctttcttcgggccgaacac
atgggcgatgccggcatcgtctattgcctgtcgcgtaaaaaggttgagcagacagcggat
tggttgaccacccagggcctgaccgcgctgccctatcatgccgggctttccgctgagatg
cgggctttgcaccagcggcgattcctgcgggaggaagggatcatcatcgtcgctaccatt
gcgtttggtatgggcatcgacaaaccagacgtacgattcgtagcccaccttgacctcccg
aaaagtgtcgaggcctactatcaggagactggccgggcaggtcgtgacgggctgcctgca
actgcctggatggcttacggcctgcaggatgtcattaccctcagacagatgttagagggc
tctcccggccatgaggacttcaagcgcgtggagcgtgcccggctggaagccatgctgggg
ctttgcgaaatggtcagctgccggcgacaggcgcttttgcgctatttcggtgagacaggg
acgccaccgtgcggtaattgcgatacctgcctgacacctgtcaaaacccgcgatgccacg
acggaagttcaaaaggcgctttcctgtgtctatcggacaggtcagcgttttggcgttaac
cacctgatcgatgtactgcggggcagccagggcgaaaaaataaagcagttcgggcatgac
caggtgagcacctttgggataggcgctgaaacttctgcccagcagtggcgggccattttt
cggcaactggtggcgaaaggcctcctggaggtggacctggaggggttcggcggcttgcgg
ctaactgaagcttgccgccccatcctgaaaggcgaacaacatatcgagctcgccgaagat
gcccccgcaaaagcgtccaggtcatccaggggctccagcagcaagaaagaaattctggac
ctgtcgccggctgagatgatgcagtgggaagcactgagagcctgtcgcaagcgtctggcc
gacgagcaaggcgtcccgccctacgtgatcttccacgatgcaacgctgctggagatactg
cgcggcgcgccgcaaacgctggatgatctccagactatcaatggtgtaggcgagcgtaag
ctggaaaagtacggagccgatttccttgaggttacgcgcggcggctga
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