Hydrocarboniclastica marina: soil367_09075
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Entry
soil367_09075 CDS
T06192
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
hmi
Hydrocarboniclastica marina
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA
HTH_50
bpMoxR
AAA_2
HTH_17
HTH_30
AAA_19
HTH_23
cREC_REC
nSTAND3
AAA_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QCF26067
UniProt:
A0A4P7XJM4
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All DBs
Position
complement(2016890..2018356)
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AA seq
488 aa
AA seq
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MSNLHVVNSASQSVGDSRAERNGVKVSEKLPHHEAQTPRVVKAPQVLIVDSDINSLSLLA
QLVAKEGFITYTATSLAEAQKCISRRCPELILLDLTLPESDGRDLLKVFSAHQKGKHPQI
VVISDSSREAVNQHAQPITGYLVKPIQLPDLRRVLDNASGTSGAERESLNCRDDVRKPDR
FGRLMGSSRVMQRVYDQIERVAPTCASVLLTGESGTGKEVVAQTIHELSSRRGAPFLPVN
CGAISPQLIESELFGHEKGSFTGAVRDHRGFFERANGGTLFLDEITEMPVELQVKLLRVL
ETRFFARVGSDRELETDVRIVAATNRTPEDAVKEGFLREDLLYRLQVFPIHLPPVRDRGE
DIGLLASYFLAELNRKERASKRFSEAAMEALERYHWPGNLRELKNVVYRAFIMADDVIEG
THFPGEIINDEKIVGPSFTVRVGSSVAEVEKNLIMATLEQCEGKKEKAAEILGVSVKTLY
NRLKDYEL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatctgcacgtggtaaatagtgcatctcagtcggttggggacagcagggcagag
cgaaacggcgtaaaagtcagcgagaagttgccccatcatgaagcgcaaaccccacgcgtg
gtcaaagcccctcaggtgctgatcgtcgatagcgatataaatagcctgagtctgctggcg
cagctcgttgcaaaagaagggtttataacctatacggcgacgtcgttagccgaggctcag
aaatgcatttcccggcgttgcccggaactcattctgctggatctgacactaccggagagc
gacggccgtgacttattgaaggtattctcggctcatcagaagggcaagcacccccagatt
gtggttatcagtgacagctcccgcgaggcggtcaaccagcatgctcagccgattacgggc
tatctcgtgaaacctattcagctgcctgacctgaggcgggtgctcgataacgccagcggg
acaagcggcgccgaacgggaatccttaaactgtcgggacgatgtccgcaagccagaccgt
tttggcagacttatgggcagctcgcgggtgatgcagcgggtctatgaccagatagagcgc
gtggcacccacttgtgcctcagtgttgctgaccggagaaagcggaaccggtaaagaagtc
gtcgctcagactattcacgaactcagcagtcgccggggcgcaccttttctgcccgttaac
tgtggcgctatctcgccccagttgattgaaagcgaacttttcgggcatgagaagggaagc
tttaccggcgccgttcgcgatcaccgcggatttttcgagcgcgcaaacggcggcacgctt
ttcctggacgagatcacggaaatgcccgtcgagttgcaggttaaactcttacgcgtgctg
gagacgcgtttcttcgcgcgcgtcggctcagaccgggaacttgagacagacgtccggatc
gtcgccgctacaaacagaacgccggaagacgccgtgaaagaaggcttcctgcgcgaagat
ctcctctatcgtctccaggtttttcccatccatttaccacctgttcgggatcggggagag
gatatcggcctgctcgccagttactttctggctgaactcaatcgcaaagaaagggcctcg
aaacgtttttccgaggctgcgatggaagcactcgaacgctaccactggccgggcaacctt
cgggagctgaaaaacgttgtctatcgggcattcattatggccgatgacgtaatcgaaggg
acgcactttcctggcgaaatcataaacgatgagaaaatcgttgggccaagcttcaccgtg
cgggtcggttcatccgttgccgaggttgagaagaaccttattatggccacgcttgagcag
tgtgaaggcaagaaagagaaagcagctgagatactcggcgtcagcgtcaagaccctttat
aatcgcctcaaagactacgagctctaa
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