Hydrocarboniclastica marina: soil367_10470
Help
Entry
soil367_10470 CDS
T06192
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi02020
Two-component system
hmi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
soil367_10470
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
soil367_10470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hmi02022
]
soil367_10470
02035 Bacterial motility proteins [BR:
hmi02035
]
soil367_10470
Two-component system [BR:
hmi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
soil367_10470
Bacterial motility proteins [BR:
hmi02035
]
Flagellar system
Flagellar assembly proteins
Others
soil367_10470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
FleQ
AAA_2
AAA_16
HTH_30
MerR
AAA
nSTAND3
AAA_7
AAA_19
HTH_11
AAA_3
AAA_18
HTH_23
HTH_28
Sigma70_r4_2
AAA_22
HTH_20
ATPase
NB-ARC
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QCF26325
UniProt:
A0A4P7XHS2
LinkDB
All DBs
Position
complement(2343466..2344917)
Genome browser
AA seq
483 aa
AA seq
DB search
MAKFKILIVEDDADLRDALVTTLEVAGHKVLEAGSGEDALVSLGRETVDLVVSDVNMPGI
SGHQLMAQVHAQHPGVPVMLMTAYGQIDHAVAAIQGGAVDYLVKPFEPRLLLEAIDKSVS
GGGRRVDEPVAEDPLSQRLFQLAKKVAASDSTVMICGESGTGKEVLAQYIHRHSPRADGP
FVAINCAAIPENMLEAVLFGHEKGAFTGAHASAPGKFEQANGGTILLDEISEMEIGLQAK
ILRVLQEREVERVGGRKTLKLDVRVLATTNRDLREHVQNGRFREDLYYRLSVFPLQWQPL
RVRRGDILPMAEHLLRNHSRKMKLSGIKFEASARDALLRHNWPGNVRELDNAIQRALILQ
QGQRITADDLCLDAPLGMGSPFSAKVTEPTPMNAIPAYAPEDDQQFAPEPSKREEGLHLN
ESDQSLGRDLRQHEFQIIIDTLRLERGKRKQAAEKLGISPRTLRYKLAQMRDCGIDVDLE
LTA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattcaagattctcattgttgaagacgacgccgatctgcgcgatgcgctggta
accacgctcgaagtcgcaggtcacaaagtactcgaggccggcagtggcgaggacgcgctg
gtcagtctgggccgtgaaactgttgatctggtggtcagcgacgtcaatatgcccggcatt
tccggacatcagctaatggcgcaggtacacgctcagcaccctggcgtgcccgttatgctg
atgacggcctatggtcagattgaccatgcggtggctgcgatacagggtggggcggtcgac
tatctggtcaaaccgtttgagccgcgtcttctgctggaagccattgataaaagtgtttca
ggtggcggccgccgagtggatgagcctgtggctgaggatccgctcagccagcgcctgttc
cagttggccaaaaaggttgctgccagcgactctacggtaatgatctgcggcgagagcggg
acgggtaaagaagtactcgcccagtacatccaccgtcactcaccgcgcgccgacggaccc
ttcgtcgcgattaactgtgccgccataccggagaacatgctggaagccgtgctcttcggt
catgaaaaaggcgcgtttaccggtgcccacgcgtctgcgccgggcaagttcgagcaggcc
aatggcggaactattcttctggatgagatttcggagatggaaatcggcctccaggccaaa
atcctgcgggtgctgcaggaacgtgaagtggagcgggtcggcggtcgtaagaccctgaag
ctcgacgtccgtgtgctcgccaccaccaaccgtgacttacgcgagcacgtccagaatggc
cgttttcgcgaagacctctattaccgcctgagtgttttcccactccaatggcagccgttg
cgagtacgtcggggcgatattctgcccatggctgagcacttgttgcgcaatcacagccgc
aagatgaagttgtcgggtatcaagttcgaagccagtgcccgcgatgcgttacttcgccac
aactggccgggcaacgtccgtgagctggacaatgcgattcagcgggcgctgattctgcag
cagggtcagcgcatcactgcggatgatctctgtctggatgcgccgttgggaatgggttcg
ccattttcggcgaaagtaacagaacctacgccgatgaacgcgattccagcgtacgcccca
gaagatgaccaacagttcgccccggagccgagcaagcgggaagaaggtctgcacttgaac
gagtcggaccagtcactcggccgcgatcttcgtcagcacgagtttcagatcatcatcgat
acgctgcgccttgagcggggcaagcgcaagcaggccgccgagaaattaggcatcagccca
agaacgctccgttacaagctggcacagatgcgcgactgtggtatcgatgtggatctcgaa
ctcaccgcctga
DBGET
integrated database retrieval system
