Hydrocarboniclastica marina: soil367_10745
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Entry
soil367_10745 CDS
T06192
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmi03016
]
soil367_10745
Enzymes [BR:
hmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
soil367_10745
Transfer RNA biogenesis [BR:
hmi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
soil367_10745
Prokaryotic type
soil367_10745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QCF26375
UniProt:
A0A4P7XI33
LinkDB
All DBs
Position
complement(2406524..2407501)
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AA seq
325 aa
AA seq
DB search
MNQWRLSWPFAWGGPVATGRFKTVPEDFEVEEILTEPFSGEGEHLCLWLEKRGDNTDFIG
RQLARCLGVEHMAVSFCGLKDRHAVTRQWFSIQLPGIADDTALEKLGAEFRILSHTRNRS
KLRRGQHWGNRFVIRLREVQGDRPALETRLNILAEKGGPNYFGPQRFGHGGGNLREAEAL
DPRKLRGRNVRTGLYLSAARSWLFNEVLAARVEAGTWLNRIEGDPILERPTGPMLGDGGG
GASGPLAETENSMLAAYPAFDRLFRARRLAPERRDLCVVPRDFDMRWEGDDLILAFSLSA
GSYATSWLGEAVTLISAEPEKAPGQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtggcgtctgagttggccctttgcctggggagggccggtcgcgacgggccgg
ttcaagacggtccctgaagattttgaggttgaagaaattctgacggagccattctcggga
gagggtgagcacctgtgcctctggctcgaaaagcgtggcgacaatactgattttatcggc
agacaactggctcgctgcctgggtgtagaacatatggcggtcagcttctgcggactcaaa
gatcgccatgccgtcacccgtcagtggttcagcatacagttaccgggtattgccgacgat
acagcgctggaaaaactgggggccgaattcaggattctctcgcatacacgtaatcgcagt
aagctgagacgcgggcagcattggggcaaccgctttgtgatccggctacgtgaggttcag
ggtgaccggcccgccctggaaacacggctgaatatactggcggaaaagggcggtccgaac
tactttggtcctcaacggtttggtcatggtggtggtaaccttcgggaagctgaagccctt
gacccgcgcaaattgcggggcagaaatgtccgtaccgggctttacctgtcagcggcacgg
tcatggcttttcaacgaggttctggcagctcgggtagaggctggcacctggctcaacagg
attgagggcgatccgatcctggaacgcccgaccgggcccatgctcggggatggcggcgga
ggcgcgagcggtccgttggctgagactgagaacagcatgcttgcggcgtatcccgcgttc
gacagattgttcagagcgcgccgtctggcgcccgaacgacgcgacctttgcgttgtgcca
cgggatttcgacatgcgctgggaaggcgacgatctcattctggcattcagcctgtcggct
ggcagttacgcgacttcatggctgggagaggctgtgaccctgatctcggccgaacctgag
aaagcacccgggcagtaa
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