Hydrocarboniclastica marina: soil367_10990
Help
Entry
soil367_10990 CDS
T06192
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
soil367_10990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmi03019
]
soil367_10990 (groL)
03110 Chaperones and folding catalysts [BR:
hmi03110
]
soil367_10990 (groL)
03029 Mitochondrial biogenesis [BR:
hmi03029
]
soil367_10990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmi04147
]
soil367_10990 (groL)
Enzymes [BR:
hmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
soil367_10990 (groL)
Messenger RNA biogenesis [BR:
hmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
soil367_10990 (groL)
Chaperones and folding catalysts [BR:
hmi03110
]
Heat shock proteins
HSP60 / Chaperonin
soil367_10990 (groL)
Mitochondrial biogenesis [BR:
hmi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
soil367_10990 (groL)
Exosome [BR:
hmi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
soil367_10990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
soil367_10990 (groL)
Exosomal proteins of breast cancer cells
soil367_10990 (groL)
Exosomal proteins of colorectal cancer cells
soil367_10990 (groL)
Exosomal proteins of bladder cancer cells
soil367_10990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCF26420
UniProt:
A0A4V1D8U6
LinkDB
All DBs
Position
complement(2459429..2461072)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGDSARKKMVAGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELQDKFENMGAQMVKEVASQTNDQAGDGTTTATVLAQAIVNEGIKAVTAGMNPMDLKRGL
DKATTAAVAEIRNMARPCDDSKNIAQVGTISANSDETVGKLIAQAMEKVGKEGVITVEEG
RGLEDELDVVEGMQFDRGYLSPYFINNQDSMAVELDDPYILLVDKKISNIRELLPVLEGV
AKSGKPLMMIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKEMLQDLAILTGGTV
ISEEVGLTLENATLDDLGTAKRINITKENTTVIDGSGAEADIESRVEQIRKQIEDSSSDY
DKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGVVAGGGVALI
RALQAVINLKGDNEDQNVGIAILRRAMETPLRQIVKNAGGEPAVVVAKILENEGTFGYNA
QTDQFGDMLEMGIIDPAKVTRSALQAASSVAGLMITTECMITDHPEEDKAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtcaaattcggtgactccgcccgtaaaaaaatggtagctggtgtt
aacatcctggctgatgcggtaaaggtaacgttgggccccaagggtcgtaacgtcgtcctg
gacaagtctttcggcgcgcccaccattaccaaggacggcgtctcagtagcgaaagaaatt
gagctgcaggacaagttcgagaacatgggcgcacagatggtcaaggaagtcgcttcccag
accaacgaccaggcaggcgacggtaccactaccgcaaccgtactggcgcaggccattgtt
aacgaaggtattaaagctgtgaccgcggggatgaacccgatggatctcaagcgcggcctc
gataaggcgaccaccgctgctgttgcagaaattcgcaacatggcgcgcccctgtgacgac
tccaagaacattgcccaggtaggcacgatctccgccaacagcgacgagaccgtaggtaag
ctgattgcccaggccatggaaaaagtcggtaaggaaggcgtcatcaccgtcgaggaaggc
cgtggcctggaagacgagctggatgtcgttgaaggtatgcagtttgatcgcggctacctc
tcaccttacttcatcaacaatcaggacagcatggccgtcgaactggacgacccgtacatc
ctgctcgttgacaagaagatctccaacatccgtgaactgttgccggttctcgaaggcgtg
gccaaatctggcaagccgctgatgatgattgccgaggatgtcgaaggcgaagcgctggcg
actctggtagtcaacaacatgcgcggtatcgttaaagtcgcggccgtcaaggcgccaggc
tttggtgaccgtcgcaaggaaatgctgcaggatctggccatcctgactggcggtaccgtg
atttccgaagaagtgggtctgacgcttgaaaacgctaccctggacgacctgggcacggct
aagcgcatcaacattaccaaggaaaacaccacggttatcgacggcagcggtgctgaagct
gacatcgaaagccgtgtcgagcagatccgcaagcagatcgaagacagcagctccgactac
gacaaagagaagttgcaggagcgtgtggccaagcttgctggcggtgtcgccgttatcaag
gtcggtgccggttcagaagtggaaatgaaagagaagaaagcacgcgttgaagatgcgttg
cactctacgcgtgcagcggtcgaagagggcgtggtagccggtggtggcgttgcgctgatt
cgtgctctgcaggctgttatcaacctgaaaggcgacaacgaagatcagaacgtcggcatc
gctatcctgcgccgcgcgatggaaacgcctctgcgtcagatcgtcaagaatgcgggcggt
gagccagcggttgtcgttgccaagatcctcgagaacgagggtactttcggctacaacgct
cagaccgatcagttcggcgacatgctggaaatgggtattattgacccggccaaggtgacc
cgctctgctctgcaggctgcgtcttctgtagctggtctcatgatcaccaccgaatgcatg
atcaccgatcaccctgaagaagataaagccggtggtggcatgccggatatgggtggcatg
ggcggcatgggcggcatgatgtaa
DBGET
integrated database retrieval system
