Hydrocarboniclastica marina: soil367_11290
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Entry
soil367_11290 CDS
T06192
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00521
Streptomycin biosynthesis
hmi00523
Polyketide sugar unit biosynthesis
hmi00525
Acarbose and validamycin biosynthesis
hmi00541
Biosynthesis of various nucleotide sugars
hmi01100
Metabolic pathways
hmi01110
Biosynthesis of secondary metabolites
hmi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
soil367_11290 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
soil367_11290 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
soil367_11290 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
soil367_11290 (rfbB)
00525 Acarbose and validamycin biosynthesis
soil367_11290 (rfbB)
Enzymes [BR:
hmi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
soil367_11290 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QCF26472
UniProt:
A0A4P7XJE2
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Position
complement(2524718..2525782)
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AA seq
354 aa
AA seq
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MKLLVTGGAGFIGSALIRSIIEHTGDEVVNLDKLTYAGNLEALAEVSENPRYAFEQVDIC
DRAGVDRVLAEHQPDVIMHLAAESHVDRSIDGPAAFIETNITGTYTLLEAARAFWTSLED
TRKSTFRFHHISTDEVYGDLGETGNLFAETTPYAPSSPYSASKACSDHLVRAWYRTYGLP
ILITNCSNNYGPYHFPEKLIPLTILNALEGKPLPVYGRGEQIRDWLYVDDHARALYKVIT
EGEVGETYNIGGHNEKKNIEVVRILCELLDELMPQKPAGLTSYSDLITFVTDRPGHDMRY
AVDASKIRRELAWIPEETFETGVRKTVEWYLANLDWCRRVQDGNYRRERLGVSA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcttgttaccggcggtgccggattcatagggtcagcccttatccgttccatc
attgaacacaccggcgacgaagtggtcaatcttgataagctcacttacgctggcaacctc
gaggcactggcggaagtaagcgaaaaccctcgttacgcctttgagcaggttgatatctgc
gaccgtgctggagtagacagagtgttggccgaacatcagccggacgtcatcatgcacctt
gcggctgaaagtcacgtcgaccgctcaatagacggccctgccgcgtttatcgaaacaaat
atcacaggcacttatacactgctggaggctgcgagggcgttctggactagtttggaggac
acgcgcaagagtacttttcgcttccatcatataagcacggatgaggtgtatggcgacctg
ggcgagacgggcaacctgttcgcggagacgaccccatacgctcccagtagtccttattca
gctagcaaagcttgctcggatcacctagtgcgggcgtggtacagaacctatggactgcca
atcctgatcacaaactgctcaaataactacgggccgtaccattttcccgagaagctgatc
cctctgacgattctgaatgcgctggaaggcaagccgttgccagtctatggcagaggtgaa
cagattcgcgactggctctacgtggatgaccacgcccgagctctttacaaggtgatcacc
gaaggggaggtgggggaaacctacaatattggtggccataacgagaagaaaaacattgag
gtcgtccgtattctatgtgaacttctggacgaactgatgccccaaaagcccgcggggcta
accagctacagtgaccttattacttttgttaccgatcgccccggccatgacatgcgatat
gccgtcgacgccagcaaaattcggcgtgaactcgcatggatccctgaagagacgttcgag
acgggtgtcagaaaaacggtcgaatggtatcttgcaaatctggactggtgcaggcgggtt
caggacggtaactatcgccgggaaaggctaggagtgagcgcatga
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