Hydrocarboniclastica marina: soil367_11685
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Entry
soil367_11685 CDS
T06192
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hmi02044
]
soil367_11685
02035 Bacterial motility proteins [BR:
hmi02035
]
soil367_11685
Secretion system [BR:
hmi02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
soil367_11685
Bacterial motility proteins [BR:
hmi02035
]
Pilus system
Pilus assembly proteins
soil367_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
T4_gp9_10_N
DUF63
Closter_coat
UPF0370
Motif
Other DBs
NCBI-ProteinID:
QCF26540
UniProt:
A0A4V1D8V8
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All DBs
Position
2602557..2603777
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AA seq
406 aa
AA seq
DB search
MAAKAEKVSTFIWEGKDRKGNKAHGEITGTNPALIKAQLRKQGMMPQKVKKKPKPLFGGK
KKITPFDIALFTRQLATMMRAGVPLVQSFDIVSDGAENAALQELIQNIRNDVASGNSFAN
ALRKFPRHFDDLYCNLVDSGEKAGALESLLDRIATYLEKTELLKKKIKKAMTYPIAVVVV
AIIVTAILLVKVVPQFETLFQGFGADLPVFTQMVVNLSDWMQTWWFVILIGIVGTVMGFK
EAVRRSQKFSDAVDKYILKLPVVGDILDNSAVAKFARVLSTTFAAGVPLVDALDSVAGAT
GNAIYRDAVFKIKDDVSSGTQLQVSMKQTDVFPTMAVQLTAIGEETGNLDEMLSKVAEHY
EAMVDDMVDNLTALMEPMIMAVLGVLVGGLIIAMYLPIFQMGQVVG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaagcggaaaaagtatccaccttcatctgggaaggcaaagaccgcaagggt
aacaaagcccacggcgaaatcactggcaccaacccggctctgatcaaggctcagctgcgc
aagcagggcatgatgccgcagaaggtcaaaaagaaacccaagcctctttttggcggcaaa
aagaagattacaccctttgatattgccctgttcacacgccaactggcaaccatgatgcgc
gcgggcgttccgctggtgcagtcgtttgatattgtttctgacggtgcggaaaacgctgcg
ctgcaggaactgatccagaatattcgcaatgatgttgcttcgggtaacagtttcgccaat
gcgttgcgcaagtttccgcgacactttgatgatctgtattgcaatctggtggactcggga
gagaaggctggtgcgcttgaaagcttgcttgatcgcatcgcaacctatcttgaaaaaaca
gaactccttaagaaaaaaatcaaaaaggcgatgacgtatccgatcgccgttgtcgtagtc
gcaatcatcgtgacggcgattctgcttgttaaagtggtacctcagtttgaaaccctgttc
caagggttcggtgccgaccttccggtctttactcaaatggtagtaaacctttcagactgg
atgcagacgtggtggttcgtaatacttattggtattgtcggaaccgtaatgggcttcaaa
gaagctgtgcgccgatcccagaagttttccgatgcagtggacaaatacatcctcaagctc
cccgtggtcggcgacattctcgacaattcagcggtagcgaaattcgcccgcgttctctct
acgacttttgctgcaggggttcctctggtggatgcgctcgattctgtggccggagccacg
ggtaacgcgatctatcgggatgccgtattcaagatcaaagatgacgtctccagcggtact
cagctacaggtttctatgaaacagaccgacgtattcccaactatggcggtccagctgaca
gctatcggcgaggaaaccggtaacctggatgagatgctgagcaaagttgcagaacactac
gaggccatggtcgacgacatggtcgacaatctcacagccctgatggaacccatgatcatg
gcggtgttgggggttctggttggtggtttgataatcgccatgtacctgccgatattccag
atgggccaggtcgtcggttaa
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