Hydrocarboniclastica marina: soil367_11880
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Entry
soil367_11880 CDS
T06192
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmi03019
]
soil367_11880
Messenger RNA biogenesis [BR:
hmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
soil367_11880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_18
AAA_22
RACo_linker
AAA_29
CoaE
FtsK_SpoIIIE
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QCF26575
UniProt:
A0A4P7XIL2
LinkDB
All DBs
Position
2643154..2644032
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AA seq
292 aa
AA seq
DB search
MKLIIVSGRSGSGKSTALHVLEDLGFYCIDNLPIGLLVPLTNEALEKGSERLRHIAVSID
ARNLSDEIADFERLHKTLEQPNLSVEIIYLDAEEMILLQRFHATRRKHPLSNNRRSLKEA
ISHEKKLLEPISQLADLYVDTSDLSMYELRDIVKQRVVGRKEQELALLIQSFGFKHGVPV
DSDFVFDVRCLPNPYWDTSLRKYCGLDQPVCDFLEAQEETGELQGDIEAYLRKWLPSFRN
SNRSYMTISIGCTGGQHRSVYMAQKLGLALSEDFPNVQIRHTELPDNGSAQS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgataatcgtcagtggccgttccggctccggcaaaagtaccgcgctacacgtg
ctggaagatctcggcttctactgtattgacaaccttcctattggcctgttggtcccctta
accaatgaagcgctggagaagggttcagagaggctcagacacattgcagtcagtatcgac
gcccgcaatctgtctgatgaaatcgccgacttcgagcgattgcacaaaacgctcgagcaa
cccaacctgagtgtcgaaattatttatctggacgctgaagagatgattctgctccagcgt
tttcacgcgacccggcgcaagcacccgttgagcaataaccgtcgctccctgaaagaagcg
atctcccacgagaaaaagctgctcgaacccatatcccagctggccgacctctatgtcgac
accagcgatctgtcgatgtatgaactacgggatatcgtgaagcagcgtgtcgtaggccga
aaggagcaggaactcgcactcctgattcaatcgtttggcttcaaacacggtgtaccggtc
gattctgacttcgttttcgacgtgcgctgcctgccgaacccttactgggacaccagcctg
cgcaagtattgtggcctcgatcagccggtgtgcgattttctcgaggctcaggaggaaacg
ggcgagctccagggagatatcgaggcttacctgcggaagtggctgccaagtttcagaaac
agcaaccgcagctacatgacgatatccataggctgtaccggcggccagcatcggtctgta
tacatggcccaaaagctggggctggccctgagtgaagatttcccgaacgtccagatccgg
cacactgaactccctgataacggatctgcgcaatcatga
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