Hydrocarboniclastica marina: soil367_11980
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Entry
soil367_11980 CDS
T06192
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmi03016
]
soil367_11980
Enzymes [BR:
hmi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
soil367_11980
Transfer RNA biogenesis [BR:
hmi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
soil367_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
LuxC
Motif
Other DBs
NCBI-ProteinID:
QCF27917
UniProt:
A0A4P7XNF8
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All DBs
Position
2666723..2668063
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AA seq
446 aa
AA seq
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MAKKLFIKTHGCQMNEYDSSRMADLLMDGQKVELTDSAEDADILLLNTCSIREKAQEKVF
HQLGRWKSLKQAKPGLVIGVGGCVASQEGQAIIDRAPYVDMVFGPQTLHRLPEMIIKAGT
GGVGVVDVSFPEIEKFDNLPSPGADGPSAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVDD
VLAEIAHLAAQGVREVNLLGQNVNAYQGETHDGDTMDMAELVTLVAAIEGIDRIRYTTSH
PVEFSDALIDVYAEVPELVSHLHLPVQSGSDRILSMMKRGHTALEYKSKIRRLRKLRPDI
SISSDFIIGFPGETEKDFEATMKLIEEIGFDVSFSFIYSARPGTPAADLPDDTSMDLKKE
RLAILQNRINQHAQEISRRMVGSVQRILVTGLSRKDPGEHQGRTENNRVVNFRTDIAGVI
GQFVDVRITSALPNSLRGELVDGILY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagcttttcatcaaaacccacggctgccaaatgaatgagtacgattcctcg
cgcatggcggatctgcttatggacgggcagaaagtggaacttaccgactccgccgaagat
gccgacatcctgttgctcaacacctgctcgattcgcgagaaggcacaggagaaggtcttt
caccagctcggtcgctggaaatcactgaagcaggccaagccgggcctggtcattggcgtc
ggcggatgcgttgccagccaggagggccaggccattatcgacagggcaccctacgtcgac
atggtattcgggccccaaaccctccaccgcctgccggaaatgatcatcaaagccgggacg
ggcggcgtgggcgttgttgatgtcagcttccccgagatcgaaaaattcgacaacctgccc
agccccggcgccgacggcccctccgcgtttgtatccatcatggaaggctgcagcaagtac
tgtactttctgtgttgtaccttacacccggggtgaagaagtcagccgtcccgtcgacgat
gtgcttgcagaaatcgcgcatctggcagcgcagggggtacgcgaagtcaacctgctgggc
cagaacgtcaacgcgtatcagggcgagacgcacgatggcgacaccatggacatggctgag
ctggtcaccctggtggccgcgatcgaaggcatagaccggatccgttataccacctcgcac
ccggtggaattctccgacgccctgatcgatgtctacgcggaagtaccggagctggtcagc
cacctgcatctgccggtgcaaagcggttcagaccggattctgagcatgatgaagcgcggg
catacggcgctggaatacaagtccaagattcgtcgtctccgcaaactgcgcccggacatc
agtatttcatccgactttatcatcggttttcccggcgagaccgagaaggatttcgaagcg
accatgaaactgatcgaggagatcggcttcgacgtgtccttcagcttcatatacagcgcc
cggcccggtactcctgccgccgatcttcccgatgacacgtcgatggatctcaagaaggag
cggctggcaattctgcagaaccggatcaaccagcacgcccaggaaatatcccggcgtatg
gtcgggtcggtccagcgtatcctcgtaaccggcctctcccgcaaggaccccggcgaacac
cagggccgcacggaaaataatcgggtggtcaatttcaggaccgatattgccggagtcatt
ggccagtttgtcgatgtgcgaatcaccagcgccctgcccaattcgctccgcggcgaactg
gtcgacggcattctttactag
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