Hydrocarboniclastica marina: soil367_12845
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Entry
soil367_12845 CDS
T06192
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
hmi
Hydrocarboniclastica marina
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmi02000
]
soil367_12845
Transporters [BR:
hmi02000
]
Other transporters
Pores ion channels [TC:
1
]
soil367_12845
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
QCF26747
UniProt:
A0A4P7XLB8
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Position
complement(2857855..2860386)
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AA seq
843 aa
AA seq
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MVVNGHREPPLAGGLVQHQPQPVSKPLEIVDLSLCNCAFTLFSGTPPSTGGARRRRKGRV
ESQVHGAIEMGQFGARLRVHWPVRVALLALILLMTVASQAEEASTQQPESKPDYSAMASL
LEDEASRNRLIAELRALAENKTQEGEGDSLADKIDLSLAAPVSLAGETLDLVESISGEVT
TAVDAVTAIDFSERSGTLRDFFSALIRLGLVALVSILVYTLAHKLANPISGRAASWVEKG
QRTTRVWRELAGFVVPLLTALLSIALAWAAAWTVALFFLSPDDGIADEIAVFLNAFLIVE
GTRVLLEAFLSPEYKNLRLVPVEDSSARYWNRWAGWIIGFVGYGLLVAYPLLSDNFSPAL
GQVLALGIILVTYVTLAVLVLRNRQRGRMRLQRTSRSAGMAMTRGLLGVLARVWHILALL
YLTALMLVAINDPENGLPLMAKATAQTVLAIGLGGLLSSILTRLIGTRLRLPQSIAHWSP
ALETQLNRYLPTWMKVIRIVITFVVIAVVMDAWTGFDLAAWAESETGAWLIESATTVALI
VTGGVLVWVFAASWIEHRLTEDGPSTAASARQKTLLGLFRNAIAIAVMIVTLMIVLSELG
INIAPLLASAGVLGLAIGFGAQKLVQDIITGIFIQLENAINTGDVVTVAGYSGEAERITI
RSLGLRDLSGTYHIIPFSSVDTVSNFMRGFSYHLGEYGIAYRENTDEALDHMRAAFDELK
ENPDQSPYILDDLEVHGVTQLGDSAVMLRVRIKTMPGKQWGVGREYNRLIKRHFDAAGIE
IPFPHTTLYFGQDKDGSAPPAPITVLDRGKRNAQSDSQEPNLLGNDEDAEESDGSDRKGE
RDL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcaatggtcatcgggaacctcctctggctggcggtctagtacagcatcaaccg
cagcccgtgagcaaacctctggagattgtcgacttgtccttgtgcaactgcgcctttact
ctcttttccggaaccccgccatcgacgggtggcgcgcgtcggcgcaggaaaggtagggta
gagtctcaagttcacggagcgatagagatggggcagtttggagcaagattgcgtgttcat
tggcctgtgagggttgccttgctggcgctcatcctgttaatgaccgtcgccagccaggca
gaagaagcgtcgacacagcagccagaaagcaaacccgactacagcgctatggccagcctt
ctggaagacgaggcctcgcgtaatcggttaatcgcggagctacgggcgctggcagagaac
aaaacacaggaaggcgagggcgattctctcgctgataaaatcgacctgtcgctagcggcc
cctgtttctctggctggcgaaaccctcgatctggttgaatccatttcaggtgaagtgacg
accgctgtcgacgcagttacggcaatcgatttctctgagcgtagcggtactctaagggac
tttttcagtgcgctaattcggctagggctggtcgccctggttagtatcctggtctataca
ctggcccacaaactggccaatcccatctctggccgtgctgccagctgggtcgagaagggc
cagcgcaccacccgcgtctggcgcgagctcgcgggatttgtcgttcccctgctgacggcg
ctgctgtcaatcgctctggcctgggcagcagcctggactgtggcgctattttttctgtct
ccggatgacggcatcgcagatgagattgcggttttccttaatgccttcctgatagtagag
ggaacaagggtcctgttggaggcttttctttcgcccgagtataaaaacctgcggctcgtt
cccgtcgaagactcaagcgctcgttactggaaccgctgggccggctggattataggcttc
gtgggttacgggctgctggtggcttatccactactgagcgataatttttcgccggcgctg
gggcaggtactggcgctcggcatcattctcgtgacctacgttacgcttgcggttctcgtg
ttacgcaaccgccaacgcggccgcatgcgtcttcaacgtacttcccgctctgccggcatg
gccatgacccggggactgcttggcgtcctggctcgcgtctggcacattctggccctgctt
tacctgacggcactgatgctggtggccatcaatgatcctgagaacgggctccctctcatg
gccaaggccacggcgcaaacagtgctggcgatcgggctgggtgggctcctgtcttcgata
ttgacccggttgattggtacgcgcctgcgcctgccccaatcaatcgcgcactggtctccc
gcactggaaacccagctcaaccgttacctgcccacgtggatgaaagtgatccgtatcgtc
attacctttgtcgtcattgctgtggtcatggacgcttggacagggtttgacctggcggcg
tgggctgaatcagaaacaggcgcctggcttattgaaagcgcaacgacggtcgcacttatc
gtcactggcggcgtgttggtgtgggtttttgccgccagctggatagagcaccgcctgact
gaagatgggccttcaaccgctgccagtgcccggcagaaaaccctactggggcttttccgc
aacgccattgcgatcgccgttatgattgtcaccctgatgattgtgctgtcggagcttggc
atcaatatcgccccgcttctggcgagtgccggggttctcgggctggcgatcgggttcggg
gcgcagaagctcgttcaggacattatcaccggaattttcattcaactcgaaaacgcgata
aataccggggatgtcgtgacggtcgcgggatactccggtgaagcggagcgcatcaccatt
cgctccctcggcctgagggatctgtcgggcacttaccatataatcccgttctcttcggtc
gatacggtgtcgaacttcatgcgaggcttcagctatcacctcggcgaatacggcatcgcc
taccgggaaaacaccgatgaggcgctggatcacatgcgcgcagctttcgacgagcttaag
gaaaacccggaccagagtccctacattcttgacgatctggaggtgcacggagttacccag
ctgggcgacagcgccgttatgctcagggttcggatcaaaaccatgcctgggaaacagtgg
ggtgttggtcgtgagtacaaccgcctgataaaacgccatttcgatgcggccgggattgaa
atacccttcccgcataccacgctctatttcggacaggacaaggacggctctgcgccgccc
gcgcccatcactgtgctggacaggggtaagcgcaacgcgcagagtgatagtcaggagccg
aacctgctaggcaacgacgaagatgccgaggaaagtgatgggtccgaccgaaaaggagaa
cgggacctttga
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