Hydrocarboniclastica marina: soil367_13180
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Entry
soil367_13180 CDS
T06192
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00061
Fatty acid biosynthesis
hmi00071
Fatty acid degradation
hmi01100
Metabolic pathways
hmi01212
Fatty acid metabolism
hmi02024
Quorum sensing
hmi04146
Peroxisome
Module
hmi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
soil367_13180
00071 Fatty acid degradation
soil367_13180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
soil367_13180
09145 Cellular community - prokaryotes
02024 Quorum sensing
soil367_13180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hmi01004
]
soil367_13180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hmi04147
]
soil367_13180
Enzymes [BR:
hmi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
soil367_13180
Lipid biosynthesis proteins [BR:
hmi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
soil367_13180
Exosome [BR:
hmi04147
]
Exosomal proteins
Exosomal proteins of breast milk
soil367_13180
Exosomal proteins of breast cancer cells
soil367_13180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QCF26807
UniProt:
A0A4P7XLH1
LinkDB
All DBs
Position
complement(2940829..2942589)
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AA seq
586 aa
AA seq
DB search
MKAASDNAEENKTSAQGSAAEVYDARPWLKHYPEGTKPDLEPASYRNIGDIIRQASQENG
SKTAFTTCLPNGTTGSLTFAEVDRMTDAFAAYLRHDMGLAKGDRVAIQSPNCLAYPIFLF
GAAKAGCVIVNINPLYTVPEINHALDDSRARLLLMIDMFADKLPKVLPKSTVEQVLITSV
ADFFPPLRKALVKGVQKLKKMVPRNEVDSMPFTKAISQGEHYLKKGGSAEFDVSLDDLLA
LQYTGGTTGRPKGAMLTHRNLVSNVGQSYANLRRYLPENRTALTALPMYHIFAMGVSVIF
YSVGGHNVLIPSPRPVSNLKAAFEKFDFTFFSGVNTLFAGLLNEEWFRQSPPKNLGITIG
GGTAVQNAVAERWQDVVKNPIVQAYGLTETSPGVTTNPLERTKLGSIGIPYAGTYVRIVD
DEGNPVPQGEPGELVVKGPQVMKGYWERAEATAESIRDGWFHTGDVAIMDEDGYFFIVDR
KKDMVLVSGFNVYPNEIEEVIARHPGVLSVGVVGVPDPESGEAVRAYVVPKDDSVTEQSI
RDFCRQSLTAYKVPKKVIFREEIPMTPVGKVLRKDLRDEALKESGN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggcctctgataatgccgaagagaataaaacaagcgcacagggttcagccgcc
gaagtctacgacgcccggccctggctgaaacactatcccgaaggaacaaagccggacctc
gagcctgcgagttacaggaacatcggtgatatcattcgccaggcgagtcaggagaatggt
tccaaaacggcctttacgacatgcctgccaaacggcaccaccggcagcctgaccttcgcc
gaggtcgaccgcatgaccgatgccttcgcggcatacctgcggcacgacatgggtctggcc
aaaggcgaccgggtcgcgattcagagtcccaactgtcttgcttaccccatctttcttttt
ggcgcagccaaggcgggctgcgtcatcgtcaatatcaaccccctttacaccgtacctgag
atcaaccatgccctggatgactcccgggcgcggctgctgctcatgatcgacatgtttgcc
gacaagctgcccaaggttctaccgaagagcaccgtcgaacaggtgttgatcacgagcgtc
gctgatttctttccgccgctgcgcaaagcgctggtcaagggcgtacagaagctcaagaaa
atggtgccaaggaacgaggttgactccatgccgttcaccaaggctatcagccagggtgag
cactacctgaaaaagggtggcagcgccgagtttgatgtcagccttgatgacctgctggcg
ctgcagtacaccgggggcacaaccgggcggcccaaaggcgcaatgctgacccaccgcaac
ctggtcagtaacgtcggtcagtcctatgccaacctgcgccgctacctgcctgaaaaccgg
acggcactgaccgcgctgcccatgtaccatatttttgcgatgggcgtgagcgtgattttt
tacagcgtgggtgggcacaacgtgctgatcccgtcgccgcgcccggtgtctaatctcaag
gcggcgttcgagaagttcgacttcacctttttctccggtgtgaacacgctctttgccggc
ctgctgaacgaagaatggttccggcagtcgccaccgaagaacctgggtatcacgatcggc
gggggaaccgccgtgcagaatgctgtggccgagcgctggcaggacgtcgtcaaaaacccg
attgtgcaggcctacggtctgaccgagacgagccccggggtgaccaccaaccctctggag
cggaccaagctgggcagcatcggcatcccgtacgcgggcacttacgttcgcatcgtcgac
gacgaaggcaaccccgtaccccaaggcgagcctggcgagttggtggtgaagggaccgcag
gtcatgaaggggtactgggagcgggcagaagcgacagctgaatctattcgcgacggttgg
ttccacaccggtgacgtggccatcatggacgaggacggttacttcttcatcgtcgatcgc
aaaaaggacatggtgctggtctcgggtttcaatgtgtaccccaacgaaatcgaggaagtc
attgcgcgccatcccggcgtgctttcggtcggggtagtcggcgttcccgaccctgaaagt
ggggaagcggtcagggcgtatgtggtgcccaaagatgattctgtgaccgagcaatccata
agggacttctgcaggcagtcgctgacagcgtacaaggtgcctaaaaaagtgattttccgg
gaagagattccgatgacccctgtgggtaaggtgttgcgcaaggacctacgtgacgaggcg
ctgaaagaaagcggaaactga
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